Gene Hlac_2721 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_2721 
Symbol 
ID7401332 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp2710547 
End bp2711353 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content66% 
IMG OID643709796 
Productbeta-lactamase domain protein 
Protein accessionYP_002567362 
Protein GI222481125 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.91537 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTAAACG CGGAGGTCCA CGTCATCGAC CGCGGCGGGT TGTACTGCGA CATGAACTAC 
ATGATGGAGG CGAACACGAT CGGGAGCCAC GACGAGCCGA ATCCCGACAC CGAGTACGAC
GAGATTCCGG TGTGGAACCT CGTCATCGAC CATCCCGAGG CGACGATCCT CTGGGACACG
GGCTCGCATC ACGACGCCGC CGACGGCCAC TGGCCCGAGG GGCTCGTACA GGCCTTTTAC
CCGCACGACG CGAGCGACCA CCGCCTCGAC GACGACCTGG AGGCGGCGGG CTACTCGCTC
GACGACATCG ACGCGGTGTT CCAGAGCCAC CTCCACCTCG ACCACGCCGG CGGGCTGGAG
TTCTTCGCGG GCACCGACAC GCCCGTGTAC GTCCACGAGG AGGAGTTGAA GTTCGCCTAC
TACAGCGCGA AGACCGACGA GGGGAGCGCC GCGTACGTGC TCGACGACTT CGACCACGAC
CTGAACTGGC AGGTGCTCCA TCGCGACCGC GAGGAGCGCT TCACCGATCT GGAGTTCGTC
CGGTTCCCCG GCCACACGCC GGGGCTCACC GGCTCGGTGA TCCACCTCGA TTCCGAGGGC
ACCGTCGTGT TCACCGGCGA TCAGGTGTAC ATGGACGAGA ACTACGAGGA GGGAACCCCG
CTCGGCGGCC CCCTCGTGTG GGGGAAAACG GAGTGGGCCG AGAGCATGAA TCGGATCCGC
GAGCTGGAGC GACGCCACGA CGCCGAGATC GTGTTCGGCC ACGACCCGGA GCAGTTCGAG
GCGATCCAGC CGGGGTGGGG GGTGTGA
 
Protein sequence
MVNAEVHVID RGGLYCDMNY MMEANTIGSH DEPNPDTEYD EIPVWNLVID HPEATILWDT 
GSHHDAADGH WPEGLVQAFY PHDASDHRLD DDLEAAGYSL DDIDAVFQSH LHLDHAGGLE
FFAGTDTPVY VHEEELKFAY YSAKTDEGSA AYVLDDFDHD LNWQVLHRDR EERFTDLEFV
RFPGHTPGLT GSVIHLDSEG TVVFTGDQVY MDENYEEGTP LGGPLVWGKT EWAESMNRIR
ELERRHDAEI VFGHDPEQFE AIQPGWGV