| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_2688 |
|---|
| Symbol | |
|---|
| ID | 7400895 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorubrum lacusprofundi ATCC 49239 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_012029 |
|---|
| Strand | + |
|---|
| Start bp | 2678797 |
|---|
| End bp | 2679702 |
|---|
| Gene Length | 906 bp |
|---|
| Protein Length | 301 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 643709762 |
|---|
| Product | Tetratricopeptide TPR_2 repeat protein |
|---|
| Protein accession | YP_002567329 |
|---|
| Protein GI | 222481092 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0457] FOG: TPR repeat |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGATA AACGCGACGA CGACCGCCAC GAGTTCTCTG CCGGGCAGGG CGTCGACGCC
GAGTACGAGG AGTTCACCCT CGACCCCGAG GAGATCGACG CCGACCCGAA CACGGTCGAC
CCCGTCGACT CCCGCGTCCT CACCGACATC ATGGACAAGC GCAACGTCGA GAGCGACGCC
ATCGACGTCG AGCGGCTGAT CGACGTGGGG CTGTCGTACA TGGGGATCAA CCGCTTCGAG
GAGGCGACGG AGACGTTCGA GCGCGCCGCC AGCTTCGCCG ACGAGGACTC GCCGGAGGCC
CAGGAGGCGT GGGTGAACAA GGGCGCGGCC CACGCCGAGC TCGAAGAGTA CGATCAGGCG
ATCGGCGCCT ACGAGGAGGC GCTGCGGATC GACGGCGACT CCGAGCACGC CGCGACCGCC
GAGACCAACC TCGCGTACGC GCTCTGGGAG TCGGGCCGCG GCGAGCAGGC GCTCGAACAC
GCCGAGCGCG CCGTCGAGAT CGATCCGCGC TTCGCGGAAG CGTGGTACAA CCGCGGATTC
CTGCTGGTCG AGCGCGGCCT CGCCGAGGAC GCCGTCAGCT GCTTCGACAA CGCGATCCGA
CTCGGCTACC GGAGCGCGGG CGTACTAGAG GAGAAGGCCC GCGCACTCGA AGAGGCCGGC
GAACACGAAC AGGCCGAGGA GGTCGCCGAC CGCGCCGACG AGATCCGGCG CGAGGCGGAA
GAGCAGATGG TCGAGGAACA GACCGGTCAG GCGCCCGGAC CCGGCGGGCA GGGCCGTCAG
GGCGGCCGAC CCGGCGGACA GCCCGGTGCC GGCGGTCGGG GCGGCCGCGG CGGTCGAGGC
GGGCAGGGCG GCACCCGCGA GGAGCCGGAG CGAGAGCTCC AGGGCGAGGG GCCAGAGGGC
TTTTAA
|
|---|
| Protein sequence | MTDKRDDDRH EFSAGQGVDA EYEEFTLDPE EIDADPNTVD PVDSRVLTDI MDKRNVESDA
IDVERLIDVG LSYMGINRFE EATETFERAA SFADEDSPEA QEAWVNKGAA HAELEEYDQA
IGAYEEALRI DGDSEHAATA ETNLAYALWE SGRGEQALEH AERAVEIDPR FAEAWYNRGF
LLVERGLAED AVSCFDNAIR LGYRSAGVLE EKARALEEAG EHEQAEEVAD RADEIRREAE
EQMVEEQTGQ APGPGGQGRQ GGRPGGQPGA GGRGGRGGRG GQGGTREEPE RELQGEGPEG
F
|
|---|
| |