| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_2623 |
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| Symbol | |
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| ID | 7399849 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorubrum lacusprofundi ATCC 49239 |
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| Kingdom | Archaea |
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| Replicon accession | NC_012029 |
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| Strand | - |
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| Start bp | 2605614 |
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| End bp | 2607302 |
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| Gene Length | 1689 bp |
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| Protein Length | 562 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 643709695 |
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| Product | Rh family protein/ammonium transporter |
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| Protein accession | YP_002567264 |
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| Protein GI | 222481027 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0004] Ammonia permease |
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| TIGRFAM ID | [TIGR00836] ammonium transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.432084 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACGACCG GCGTACTCGC GAGCATCGAC CCGAGCGTCC TCGCGGAGGG CGTGAACCTG
ATGTGGGTCG CGATGGTCTG TTTCCTGATC TTCTTCATGC ACGCCGGCTT CGCGATGTTG
GAGGCCGGGC AGGTGCGCGC GAAGAACGTC GCGAACCAGC TCACGAAGAA CCTCCTCACG
TGGGGGGTCG GCGTTCTCGT GTACTTCCTG ATCGGCTTCG GGATCGAAGG CGTGGCGGGC
GGCGGCGGGT TCTCTCCGGC GTCGGCTCTC AGCGACGGCG ATTGGATCAA CAGCTGGCTG
TTCGGTGCCG TCTTCGCGAT GACAGCGGCG ACCATCGTCT CCGGCGCGGT CGCCGGTCGC
GCGAAGCTCC GCGCGTACGT GGCGTACACG ATCGCCATCT CCGCGGTCAT CTACCCGGTC
GTCGCGGGCG TCACTTGGGG CGGCGGCTTC CTCGGCGGGA GCGGGCTCGG GTTCACCGAC
TTCGCGGGCG GGATGATCGT CCACGGCGTC GGCGGCATCG CCGGCCTCAC GGCGGCGTAC
ATGCTCGGAC CGCGTATGGA CCGCTACGCG AAGGACGGCT CCACGAACGT CATTCCCGGC
CACTCGATGA CGTTCGCGGT GCTCGGCACC CTCATCCTGG CGTTCGGCTG GTACGGCTTC
AACGTCGGCA CGACCGCGAC CGTCTTCTCG GTCACGGAGT CCGGCGAACT CGCGCTCGGC
GGCTACGCCG CGGTCGGTCG CGTCGCCCTG ACGACGACGC TCGGCATGGG CGCCGGCGCG
GTCGGTGCGG CGCTCGGTTC GATGTACCTC ACGAAGAAGG TCGACACCCT GTACGTCGCC
AACGGCGTAC TCGCCGGGCT GGTCGCCGTC ACCGGGATCG CGAACCTGGC CACTTGGTGG
GGCGCCATCC TGGTCGCGCT CGTCTGCGGC CTCCAGCTCC CGCTCGTGTT CGAGTTCGTC
TCGGACAAGA TGAAGATCGA CGACGTGTGC GCGGTCTTCC CGGTGCACGG CTCCGCGGGC
GTCATCGGTG TGCTCGCGCT GCCGTTCGTC AGCGTCAACG GCTTCTCGGT CGACGTGCTC
GTCTCGCAGG TGATCGGCGT CGTCGTCATC ACCGCGTGGA CGATCGTCGC GACCGCCGTG
GTGTTCGGCG CGTTCAAGGC TCTCGGTCAG GCCCGCGTCA CCTCCGAACA CGAGCGCGAC
GGGCTCGACG TCAGCGAGCA CGGCGTCGAG ACGTACCCCG AGTTCGGTAA GGCGAACGTC
GCGACCGACG GCGGCTCCTC GATCGTCGAC ACCACTGACA CGGTCGAGAA CTCTCCGCGC
GCCGACGGCG GCGAGGAGGC CGGCTCGGAG ATCAAGATGG TCACCGCGGT CGTCCGTCCC
GACAAGCTCG GGGCCATCAA GCAGGCGCTC GCGGAGATCA ACGCGCCCTC GCTCACCGTC
ACGAACGTCT CGGGCCGCGG CAGTCAGCCG GCCAAAACGG GCCAGTGGCG CGGCGAGGAG
TTCACCGTCG ACCTCCACCA GAAGGTAAAA ATCGAGGTCG TGGTCGCCGA TATCCCGGCC
GACGAGGTCG CGGAGGCCAT CAGCGAGGCC GCCAAGACCG GCGAGCCCGG TGACGGCAAG
GTGTTCATCC TGCCCGTCGA AGACGCCCTG CAGGTCCGGA CGGGCGCGAC CGGCCCGGGG
GCGGTATAA
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| Protein sequence | MTTGVLASID PSVLAEGVNL MWVAMVCFLI FFMHAGFAML EAGQVRAKNV ANQLTKNLLT
WGVGVLVYFL IGFGIEGVAG GGGFSPASAL SDGDWINSWL FGAVFAMTAA TIVSGAVAGR
AKLRAYVAYT IAISAVIYPV VAGVTWGGGF LGGSGLGFTD FAGGMIVHGV GGIAGLTAAY
MLGPRMDRYA KDGSTNVIPG HSMTFAVLGT LILAFGWYGF NVGTTATVFS VTESGELALG
GYAAVGRVAL TTTLGMGAGA VGAALGSMYL TKKVDTLYVA NGVLAGLVAV TGIANLATWW
GAILVALVCG LQLPLVFEFV SDKMKIDDVC AVFPVHGSAG VIGVLALPFV SVNGFSVDVL
VSQVIGVVVI TAWTIVATAV VFGAFKALGQ ARVTSEHERD GLDVSEHGVE TYPEFGKANV
ATDGGSSIVD TTDTVENSPR ADGGEEAGSE IKMVTAVVRP DKLGAIKQAL AEINAPSLTV
TNVSGRGSQP AKTGQWRGEE FTVDLHQKVK IEVVVADIPA DEVAEAISEA AKTGEPGDGK
VFILPVEDAL QVRTGATGPG AV
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