Gene Hlac_2622 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_2622 
Symbol 
ID7399848 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp2604060 
End bp2605397 
Gene Length1338 bp 
Protein Length445 aa 
Translation table11 
GC content67% 
IMG OID643709694 
Productglutamate-1-semialdehyde aminotransferase 
Protein accessionYP_002567263 
Protein GI222481026 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0001] Glutamate-1-semialdehyde aminotransferase 
TIGRFAM ID[TIGR00713] glutamate-1-semialdehyde-2,1-aminomutase 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.96805 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCACG AGCGCTCCCG CGGGCTGTAC GACCGCGCGC TGTCGGTCAT GCCCGGCGGC 
GTCAATTCCT CCGTCCGGGC GACGATGCCG CACCCATTCT TCATCGAGCG CGGAGACGGC
GGCCACGTCA TCGACGCCGA CGGCAACCGG TACGTCGACT GGGTGATGGG GTACGGGCCG
CTGTTATACG GCCACGACCT GCCCGACCCG GTCCAAGCGG CGATCCAGTC GCACGTCGCC
GCGGGCCCGA TGTACGGCGC TCCCACCGAG ATCGAGGTCG AACACGCCGA GTTCGTGGCG
CGGCACGTCC CGAGCGTGGA GTCGATCCGG TTCGTCAACT CGGGGACGGA GGCGACCGTC
TCGGCGGTGC GACTCGCGCG CGGCCATACC GGCCGCGACA AGATCGTCGT GATGCAGGGC
GGCTACCACG GCGCGCAGGA GTCGACGCTC GTGGAGGGGT CGCCGGGGGA CGCCCATCCC
TCAACGAAGG GGATCCCGGA ATCGTTCGCC GAACACACCC TCCCGATCCC CTTTAACGAC
CCGCAGGCGG CGAAGAAGGT GTTCGCGGAA CACGGCGATG ACATCGCCGC CGTCCTCGTC
GAGCCGATCC TCGCCAACAT GGGTATCGTC ACACCGATCG ACGGCTACCA CGAGACGCTC
CGGGACCTCT GTGACGACCA CGACTCCCTC CTCGTCTTCG ACGAGGTGAT CACCGGGTTC
CGCGTCGGCG GCCTCGGCTG CGCGCAGTCG AAGTTCGGCG TCACCCCCGA CGTGACGACG
TTCGGCAAGA TCATCGGCGG CGGATTCCCG GTCGGCGCGA TCGGGGGGCA AGCGGAGATC
ATCGAGGAGT TCACGCCCGC GGGCGACGTG TTCCAGTCCG GCACGTTCTC CGGGCACCCC
GTGACGATGG CCGCCGGCAA GGCGTCGTTG GAGTACGCCG CCGAGAACGA CGTGTACGAG
CACGTCAACC GCCTCGGCCG CAAACTCCGC GAGGGAATCA CCGAGATCTG CACGGAGCGC
GCGCCCGAGT ACACCGTCGT CGGCACCGAT TCGATGTTCA AGACGATTTT CACCCGAGAC
GCGCCCGACG ACCCGGACGC TTGCTGTGCC GGTGGATGCC GACAGAACCC CGACTGCGAC
CGCTACGACA CCTGTCCGAA GAACGGCGCC GACGTCGCCC GCGCCGCCAC CGACCGCTGG
GAGCGCGTGT TCTGGCAGGA GATGAAAGAG CAGGGCGTGT TCCTCACGGC CAACCAGTTC
GAGTGTCAGT TCACCTCTTA TGCGCACACG GAGGAAGACG TCGAGGAGAC GCTTGCGGCG
TACCGGGAAG CGATCTGA
 
Protein sequence
MNHERSRGLY DRALSVMPGG VNSSVRATMP HPFFIERGDG GHVIDADGNR YVDWVMGYGP 
LLYGHDLPDP VQAAIQSHVA AGPMYGAPTE IEVEHAEFVA RHVPSVESIR FVNSGTEATV
SAVRLARGHT GRDKIVVMQG GYHGAQESTL VEGSPGDAHP STKGIPESFA EHTLPIPFND
PQAAKKVFAE HGDDIAAVLV EPILANMGIV TPIDGYHETL RDLCDDHDSL LVFDEVITGF
RVGGLGCAQS KFGVTPDVTT FGKIIGGGFP VGAIGGQAEI IEEFTPAGDV FQSGTFSGHP
VTMAAGKASL EYAAENDVYE HVNRLGRKLR EGITEICTER APEYTVVGTD SMFKTIFTRD
APDDPDACCA GGCRQNPDCD RYDTCPKNGA DVARAATDRW ERVFWQEMKE QGVFLTANQF
ECQFTSYAHT EEDVEETLAA YREAI