| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_2608 |
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| Symbol | |
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| ID | 7399834 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorubrum lacusprofundi ATCC 49239 |
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| Kingdom | Archaea |
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| Replicon accession | NC_012029 |
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| Strand | - |
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| Start bp | 2588435 |
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| End bp | 2590693 |
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| Gene Length | 2259 bp |
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| Protein Length | 752 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 643709680 |
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| Product | Sec-independent periplasmic protein translocase |
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| Protein accession | YP_002567249 |
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| Protein GI | 222481012 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0805] Sec-independent protein secretion pathway component TatC |
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| TIGRFAM ID | [TIGR00945] Twin arginine targeting (Tat) protein translocase TatC
[TIGR01912] Twin arginine targeting (Tat) protein translocase TatC, Archaeal clade |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.161385 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.756287 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGAGTG CCCTCGACGA GGATACCCAG CAGTCGCTCG CGGAAGGACG CGAGTCGGCG
AAGGCGTTCC TCCGGTCGAT CCAGAAGGAC CTTCAGAAGG TGTTCGTCGT CTTCCTGTTG
GGCTTTCTCG CGACGTTCTG GGCGCTCCGC GTGTTCATCT GGGACTCCCT CTACAACATT
ACACAGTCGA ACATGTCGCC CGAGGTCGCC GCTGAGGCCG ACGTAATCGC CACCACCCCG
TTCGAGGTGA TCCTCCTGCA GGCGAAGATC GGGCTAATCG TCGGTGTGAT CTTCGCAATT
CCGCCCTTCA TCTACGTCGC CCGCGACGAG CTTCGCGCTC GCGGGGCATG GCCGCAGTCA
CCGGTTGCGC GCTGGAAGCT CGCGGGAATG GGGCTCCTCG GTGTCGGCCT GTTCGTGGTC
GGCGTCGCCT ACGGGGTCTA CGCCTTCTTC CCGATCATGT TCTCCTTCCT GGCCGGCTTC
GGGCTGGAGG CCGGGCTCCA GCCCACCTAC GGGATCGTGA TGTGGACGGA GTTCATCGTC
TTCCTCTCGC TTTCGTTCGG ACTTGCCGGA CAGATGCCGC TTCTCATCAC CGGGCTCTCC
TACTCGGGCA TCGTCCAGTA CGAGACGTTC CGCGACAAGT GGCGCTACGC GGTCGTCGCC
ATCTTCGTCT TCGGCGCCGT GTTCTCCCCG CCGGACCCGT TCACCCAGCT GATGTGGGCA
TTCCCGCTCA TCGTCCTGTA CGGATTCAGC CTCTACCTCG CGAAGCTCGT CGTCACGGCC
CAGCGGAGCT CCGACCGCAT CGACGTGCTC GGCGCGGCCC GCAACCACTG GAACATCGTG
GGCGGCGCGG CCGTCCTCGG CAGCGGGCTC GTGTACGCCT TCTACGAGTA CGGCGGACGG
ACCGGCTTCA ACGATCTCCT CCGACTCGCC AACAGCGACT GGCGCTTCCT CGAACCCGGT
GCGAGTCTCG GCGTCAACCC AGCGACTGCG ACCGCGATCT ACGCCGCCGG ATGGGCGCTC
GCATTCGTCG CTGTCGCGAC GCTGTGGGCC GTGTTCGCCG ACCTCGACAC GACGAGCGCG
GGCTACCAGT ACGGCGACCC GGCCGCCATC GACGTGGGCG AACTCGACGC GGCCGGCGTC
CGTGCCGCCC CGGACAACGC CTTCGCGGAG ATGGACGAGG AAGAGTCGCT CGCGCTCGCG
CAGGCCGCGA TCGACGACGA CGACCCTGAG AAGGCGCAGG CGATCCTCGA CCGGTTCGAC
GCGGTACACG GCGAGGGCGA CGGCGACGAT GGAGCGGACG GCTCTGCGAC GGGGAGCGGA
GACGGGGCGG GTCGTTCCGG CGGCTCGGGC GGCTCTGGCG GCTCGGGCGG CTCCGGCGGC
GACGACGGCC TGATGGGAAC CGTTCAGGAC CGCACGTCCC GAGCCAGCTC CACGTTCCTC
TCCGAGCTCA CTGACGGCGA CGAAGAGGAG GCCGAAGACG ACATCGGCGG CTACTACAAG
GACCTCAAGT TCATCTTCGA CTCGTTGCGG TCACGGTCGT TCCGGCTCGT CGCCGTCTTC
GGCGGTGTGA TGGCGGCCGT GTTCACGTGG CTGTACCTCG GCGGACTCGC GACGGTGCGC
AACGACTTGG AGTCGCGCGT TCCGGCCGAG ATCGAGGGCG GGATCAACAT CATCACGCTC
CACCCGGTCG AGGCGCTGAT CTTCATGGTG AAGTTCTCGG TGCTGCTCGG GATCGTGGCC
GTGTTCCCGG TCGCGCTCTA CTACGCGTGG CCCGCCCTCC GCGAGCGTGG CTTCGTCGCC
GGGCGGATCT ACAAGGTGTA TCTCTGGGCG GGCGCGCTGC TCGGCGGGCT GCTCGGCGGC
TTCGCGCTCG GGTACGCCTA CATCGCACCC GGTATCATCG GGTGGCTCGT CACCGACGCC
GAGCTGGCGA ACATGATCAT CACCTATCAG GTGAGCGACT TCCTCTGGCT CGTCGTCTAC
ACCACCGTCG GGATCGGCTT CCTCGCGGAC ATCCCGATCG CGATGATCCT GCTGAACAAC
GCCGGGATCC CGTACGATGT CTTCCGGAAC CGCTGGCGCG AGGTCACCGT CGGGATCATG
CTGTTCGCGG CGGTGTTCAC CCCTGCCGAC GTGATCACGA TGTTCCTCGC GACGCTCCCG
CTGATGGCGG CGTACGGCGT CGGCATCGGC GTCCTGTTCC TCGTCACGCT CGGCGGCCGG
CGGGACCTCT CGCCGCCCTC GGAGTTCGTC GGGCGCTGA
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| Protein sequence | MASALDEDTQ QSLAEGRESA KAFLRSIQKD LQKVFVVFLL GFLATFWALR VFIWDSLYNI
TQSNMSPEVA AEADVIATTP FEVILLQAKI GLIVGVIFAI PPFIYVARDE LRARGAWPQS
PVARWKLAGM GLLGVGLFVV GVAYGVYAFF PIMFSFLAGF GLEAGLQPTY GIVMWTEFIV
FLSLSFGLAG QMPLLITGLS YSGIVQYETF RDKWRYAVVA IFVFGAVFSP PDPFTQLMWA
FPLIVLYGFS LYLAKLVVTA QRSSDRIDVL GAARNHWNIV GGAAVLGSGL VYAFYEYGGR
TGFNDLLRLA NSDWRFLEPG ASLGVNPATA TAIYAAGWAL AFVAVATLWA VFADLDTTSA
GYQYGDPAAI DVGELDAAGV RAAPDNAFAE MDEEESLALA QAAIDDDDPE KAQAILDRFD
AVHGEGDGDD GADGSATGSG DGAGRSGGSG GSGGSGGSGG DDGLMGTVQD RTSRASSTFL
SELTDGDEEE AEDDIGGYYK DLKFIFDSLR SRSFRLVAVF GGVMAAVFTW LYLGGLATVR
NDLESRVPAE IEGGINIITL HPVEALIFMV KFSVLLGIVA VFPVALYYAW PALRERGFVA
GRIYKVYLWA GALLGGLLGG FALGYAYIAP GIIGWLVTDA ELANMIITYQ VSDFLWLVVY
TTVGIGFLAD IPIAMILLNN AGIPYDVFRN RWREVTVGIM LFAAVFTPAD VITMFLATLP
LMAAYGVGIG VLFLVTLGGR RDLSPPSEFV GR
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