Gene Hlac_2566 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_2566 
Symbol 
ID7399791 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp2542106 
End bp2542603 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content67% 
IMG OID643709638 
Productflagellin 
Protein accessionYP_002567208 
Protein GI222480971 
COG category[N] Cell motility 
COG ID[COG3354] Putative archaeal flagellar protein G 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.577565 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAGCG TTCCCGTCTC GCACCTCATC CTGTTCATCG CAAGTCTCGT GATCGCCGCC 
GGCGTGGTCG GCACGATCAC CACGGGGGTC GATCGCGTGA GCGCGGCGGT CGAGGACGCC
GGGCTCGATG CGACCGAACA GCTCCGGACC GACGTGACAA TTATCTCCGA CGCGAACGCG
GGGGTGTACA ACGCCAGCGG CCAGCAGAAC GTCACGCTCT TGATCAAGAA CACCGGCACC
TATCGGCTCG CGCCCGACGG CTCGGGACTC GATGTCGTCT TCGACGGCCA GTACATCCCG
CCGAGCGCGG CTGACGGCGA GCTCGTCTCT GCCGACAACG GCGCGGTCTG GAGCCGCGGC
GACGTGTTGC GTCTCACGAT CAACGTGAAC GAGCTCGACG GGACGAACGG CGGGCTCGCC
GACGGCGACC ACCGGGTGTA CGTCACCGCC AACGGCGACG AGGAGCTGTT CCAGTTCCGC
GTGGAGGGGG GTAACTGA
 
Protein sequence
MASVPVSHLI LFIASLVIAA GVVGTITTGV DRVSAAVEDA GLDATEQLRT DVTIISDANA 
GVYNASGQQN VTLLIKNTGT YRLAPDGSGL DVVFDGQYIP PSAADGELVS ADNGAVWSRG
DVLRLTINVN ELDGTNGGLA DGDHRVYVTA NGDEELFQFR VEGGN