| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_2564 |
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| Symbol | |
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| ID | 7399789 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorubrum lacusprofundi ATCC 49239 |
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| Kingdom | Archaea |
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| Replicon accession | NC_012029 |
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| Strand | + |
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| Start bp | 2539786 |
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| End bp | 2541648 |
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| Gene Length | 1863 bp |
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| Protein Length | 620 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 643709636 |
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| Product | Flagella accessory C family protein |
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| Protein accession | YP_002567206 |
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| Protein GI | 222480969 |
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| COG category | [N] Cell motility |
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| COG ID | [COG3351] Putative archaeal flagellar protein D/E |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.840692 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCCTCG AACTACCGGT GTGGGGAGCT CCAACGGCCG CATGGATAGT CGCCACGCTG
GGGCTCGTCG GTGCGAGCGT CCTCGACAGG TTCCTCGACG ATGACGGCTC CGACGACGAC
GATTCCGGGG GCATGGGCGG CGGCGACGAC CCCTTCGGCG GCGGCGGGAT GGGCGGCGGT
GGCGGCGGGA TGGGTGGTGG CGGTGGCGGC GGAATGGGCG GCGGCGACGA CTTCGACGAC
TTCGACGGAA TGGACGAGTG GGACGACGAC TTCGACGACG GCGGCGGTGG CGGATCGGAC
ACCGACGAGC TGGAGAAACG GCTCGACGAC CTGGAGAACG AGGTCTCCTC GCTCTCGTCG
ACCGTCTCGA CCGTCCGTTC GGAGAACGAG GAGATCTCGG CCGCCGTCGA CGACATCGAG
GAGGACGTGC GGAACTTACT CGACATCTAC GAGATGGTCA CCCGCGGCAT CAATCCGTTC
GTCGACGACT CCAGCGGTTT CGACGGGGTC GACGACGGCA GTGAGGGGTC GTTCGGCCTC
TTCGACGACG ACGAAGAAGA GAACGAAGCC GACGACGATC TCGACGAGGA CGTCGCGAAC
GCGGACGCCG ACGGGTTCTT CGACGACGAC CTGCTCGACG ATGACCTTGA AGACGATGAC
GACGAGTTCG CCGAGCTGGA CGAGGAACCG GACGACGAGC ACACGGACGA CGGCGACTCC
GCCGACGCCG CGTCCGAGAC CGCGGCGGCG GACGACGGAG ACGACATGAA CGACGATGGA
AAGAGCTTCA GCGAGCTGAA AGAGGAGTAC GACGCCGGGG AGGCCGACTG GGCCGACGAA
GACGGCGCCG AAACGGACGC GGATGCGGCC GCGGACGAAG ACCCGTTCGA CGACGGGGGC
GACTCGTTCG AAGACGATCT CGGCGGCGAG CCGGACCCGT TCGACGATGG TCCCGGCGAC
GATGGGCCCG CCGATGACGG CGTCGACTCG TTCGACGAGG GGATGGGCGC GTTCGACGAT
GGTCCCGTCG ACGACGGTCC GGTGACGAAC GGCCACGAGC CGGAGTCGGA ACCCGACCCG
GAGGCCGACC GCTCGCGCGG CCCACAGCCC GGCGGCGATC CCGCCGAGGC GAGCGGCGAC
GGCTTCGAGT ACGTCCGCGA GGGCGATCTT TCTGGGACCC GCGGCAAGCC GTACCTCACG
GAGCTGCCCG GCGACTACGT CGGCGACCTC CTCGTGATGG AGTGGCTGGA GTTCCTCGTC
TCCGAGAGCG ACGTCACCGA CGCGGTACGC GCGATCAACT ACTACGAGCG CATCGAGTGG
GTCGGTCCCG AGGCCGCCGC GCGGCTCCGC GACTTCCTCT CCGGGTTCGG CACGATCGAC
CGCAACCTCG TCGACCGACC CGGGACCGAC CGGCTGGTCC GTGAGCACCA CACCCGCAGT
CTCCGGTACG TGACCCAACT CAACGGGACG AGCGGTCATC TGCTGCTGCT CGACCGCTGG
GACGATCTCG CCGGCGGTTC GCTGGTCGGG GGCGGCCCGC CACGGATCGG TTCGGGGGGT
CGCAGGGGGC GAGGAGGTCA CGGGGGGCGC GGTCGTCGCG AGGAACGTTC CCCACGCGAG
GATCGCAGTA GCGACGGCCG CGACCGGCAC GCGAGCGAGA ACGGTCACGG CGGCGACGCG
GAAAACCGAA ACGGCCACGC GGAGAGACGG AACGGCCACG CGGAGAGACG GGACGACCAC
GCGGACCGTC ACGGGTCCGA GGGCCGCGAG CGCAACGACG GCTCTCCACG GCCGATGAAC
GACCCGAACC CGCGTTCCGA CCGCGCCGAC CCGGCCGACG GAGGGTGGGG CGATGGGCGT
TAG
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| Protein sequence | MGLELPVWGA PTAAWIVATL GLVGASVLDR FLDDDGSDDD DSGGMGGGDD PFGGGGMGGG
GGGMGGGGGG GMGGGDDFDD FDGMDEWDDD FDDGGGGGSD TDELEKRLDD LENEVSSLSS
TVSTVRSENE EISAAVDDIE EDVRNLLDIY EMVTRGINPF VDDSSGFDGV DDGSEGSFGL
FDDDEEENEA DDDLDEDVAN ADADGFFDDD LLDDDLEDDD DEFAELDEEP DDEHTDDGDS
ADAASETAAA DDGDDMNDDG KSFSELKEEY DAGEADWADE DGAETDADAA ADEDPFDDGG
DSFEDDLGGE PDPFDDGPGD DGPADDGVDS FDEGMGAFDD GPVDDGPVTN GHEPESEPDP
EADRSRGPQP GGDPAEASGD GFEYVREGDL SGTRGKPYLT ELPGDYVGDL LVMEWLEFLV
SESDVTDAVR AINYYERIEW VGPEAAARLR DFLSGFGTID RNLVDRPGTD RLVREHHTRS
LRYVTQLNGT SGHLLLLDRW DDLAGGSLVG GGPPRIGSGG RRGRGGHGGR GRREERSPRE
DRSSDGRDRH ASENGHGGDA ENRNGHAERR NGHAERRDDH ADRHGSEGRE RNDGSPRPMN
DPNPRSDRAD PADGGWGDGR
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