11 homologs were found in PanDaTox collection
for query gene Hlac_2542 on replicon NC_012029
Organism: Halorubrum lacusprofundi ATCC 49239



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_012029  Hlac_2542  deoxyribonuclease/rho motif-related TRAM  100 
 
 		 166 aa  331  3e-90  Halorubrum lacusprofundi ATCC 49239  Archaea  normal  1  normal  0.430828 
 
 
-
 
NC_013202  Hmuk_1021  deoxyribonuclease/rho motif-related TRAM  64.85 
 
 		 145 aa  186  1e-46  Halomicrobium mukohataei DSM 12286  Archaea  normal  1  normal  0.225066 
 
 
-
 
NC_013743  Htur_3330  deoxyribonuclease/rho motif-related TRAM  57.3 
 
 		 174 aa  182  2.0000000000000003e-45  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_013158  Huta_1622  deoxyribonuclease/rho motif-related TRAM  73.68 
 
 		 157 aa  179  2e-44  Halorhabdus utahensis DSM 12940  Archaea  normal  0.547238  n/a   
 
 
-
 
NC_013922  Nmag_1390  deoxyribonuclease/rho motif-related TRAM  54.8 
 
 		 171 aa  171  2.9999999999999996e-42  Natrialba magadii ATCC 43099  Archaea  normal  1  n/a   
 
 
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NC_013385  Adeg_1295  RNA methyltransferase, TrmA family  39.29 
 
 		 436 aa  45.8  0.0003  Ammonifex degensii KC4  Bacteria  normal  1  n/a   
 
 
-
 
NC_013202  Hmuk_3210  deoxyribonuclease/rho motif-related TRAM  36.07 
 
 		 136 aa  44.3  0.0008  Halomicrobium mukohataei DSM 12286  Archaea  normal  0.217613  normal  0.112347 
 
 
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NC_011661  Dtur_0703  RNA methyltransferase, TrmA family  32.86 
 
 		 448 aa  42.7  0.002  Dictyoglomus turgidum DSM 6724  Bacteria  normal  1  n/a   
 
 
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NC_012029  Hlac_0552  deoxyribonuclease/rho motif-related TRAM  34.38 
 
 		 138 aa  41.2  0.006  Halorubrum lacusprofundi ATCC 49239  Archaea  normal  0.0697553  normal  1 
 
 
-
 
NC_013745  Htur_4614  cyclic nucleotide-binding protein  37.1 
 
 		 134 aa  41.2  0.006  Haloterrigena turkmenica DSM 5511  Archaea  normal  1  n/a   
 
 
-
 
NC_013158  Huta_2908  deoxyribonuclease/rho motif-related TRAM  34.43 
 
 		 132 aa  41.2  0.007  Halorhabdus utahensis DSM 12940  Archaea  normal  1  n/a   
 
 
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