Gene Hlac_2527 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_2527 
Symbol 
ID7401580 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp2505002 
End bp2505676 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content66% 
IMG OID643709600 
Productprotein of unknown function DUF1508 
Protein accessionYP_002567170 
Protein GI222480933 
COG category[S] Function unknown 
COG ID[COG3422] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.595982 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.191056 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGAAA AAGCGGTTCA CGAGTCGCGG CAGTCACGGA GCCGACAGGC GCTTGCCACC 
TACTTCCGAC GCATCGCACG GGCGCTCGGT CGCGGGGAAC CGGTCCCCGT CGACGACGCC
GGTACGGTGA CGGTCGATCC GGCCCCAGAA CAAGAGGTCG AGATCGAACT CGAACGCGAG
GACGGGATGG TCCACTTCGA GATTGAGATG GAGTGGCCGG AGACGGAGGG TGAGATCAAC
GACGACGCTG CCGCGAGCAA GGCGGCCTTC GAACTATACA CAGACAGCGT CGACGAGTGG
CGCTGGCGGC TCGTCCACGA CAACGGGAAC ATCATCGCCG ACGGCGGCGG TGGGTACTCG
GACAAACGCG ACGCCAAGTC GGGCATCGAG AGCGTCCAGC GGAACGCGCC CGGCGCCCAC
GTGATCGACA TCTCTCGCGA CGAGGAGGCA CCCGACGAAG GAGGGAGCGA CGCCACCTTC
GAGATATTCA GGGACACGGC GGACGAACAC CGCTGGCGGC TCCGCCACGA CAACGGGAAC
GTCATCGCCG ACGGCGGACA GGGGTACGCC TCCAAACAGA AAGCGAAACA GGGACTTAAC
AGCGTGAAGT CGAACGCGCC CGGCGCGGCA GTCGAGGAGG CGGGAGACGG CGAGCCAACT
GACGAGGAGG AGTAG
 
Protein sequence
MPEKAVHESR QSRSRQALAT YFRRIARALG RGEPVPVDDA GTVTVDPAPE QEVEIELERE 
DGMVHFEIEM EWPETEGEIN DDAAASKAAF ELYTDSVDEW RWRLVHDNGN IIADGGGGYS
DKRDAKSGIE SVQRNAPGAH VIDISRDEEA PDEGGSDATF EIFRDTADEH RWRLRHDNGN
VIADGGQGYA SKQKAKQGLN SVKSNAPGAA VEEAGDGEPT DEEE