Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hlac_2463 |
Symbol | |
ID | 7400582 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorubrum lacusprofundi ATCC 49239 |
Kingdom | Archaea |
Replicon accession | NC_012029 |
Strand | - |
Start bp | 2440761 |
End bp | 2442077 |
Gene Length | 1317 bp |
Protein Length | 438 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 643709537 |
Product | major facilitator superfamily MFS_1 |
Protein accession | YP_002567108 |
Protein GI | 222480871 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2211] Na+/melibiose symporter and related transporters |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.132377 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGGACTGC TCTCGGGCGT CGCCGACACC GATCGCCGGG TGATCGTGCT CGCGCTCGCC CGGATGGTCG GCGCCGCCGG CAACTCCTTT CTCATCGTCG TCCTGCCGCT GTATATCGCG AGCGACCTGA TCGATATTGA GTCGCTTCTC GGAACAGCGG TCGGGGTCGG CGCGGCGTCG GTGACCCTAA CCGAGCCGCT GCTCATCGGG GTCGTACTCT CGCTGTTCGG CTTTCTCAAC AGCTTCTCAC AGCCCCTGAC GGGTCGGCTC TCGGACCGGA TGGGCGTGCG CCGGCCCTTC GTGTTGGCCG GAATCCTGCT TTTGGGAACC GCCAGCGGGC TCTACATGAT CGCGGACGCC TACTGGCAGC TGATCGCGCT CCGCGCCGCC CAGGGATTCG GCGCGGCGCT CATCATCCCG GCGACGGTCG CGCTGGTCAA CGAGTACGCC GCGAGCGACG CCGACCGCGG CGGGAACTTC GGCGTGTACA ACACGTTCCG GCTGATCGGT TTCGGCTTCG GTCCGGTCCT CGCCGGCGTC GTCGTCGAGC GCGGCCCGTA CGACCTCTCC GCGATCGGGC TCCCGGTCCT CGACGGGTTC GACGCCGCGT TCGCGGCCGC CTGCGCCGGC GCGTATCTCA GCTTCGCCCT CGTCTTCCTC CTCGTGCGCG ACGCCGCCAA GTCGAGCGAG GCGAGCGACG ACCTCTCGAT CCGGGTCCGC GGTGAGGGCC GCCTGCTCGA CCCGGTGTTC GCGCTCGGCT TGGCGACGGT CGCGATGGGG ATCTGTATCG CGCTGTACGC GACGCTCCAG ACGCAGGTGA ACGCCCGACT CGACCAGCCG CCGGTGTGGT TCGGCCTCCA GTTCGCGGCG GTCACCATCG CGAACGTCCT GTTTCAGGTG CCCGTCGGGC AGGCCAGCGA CCGGATCGGG CGCCGGCCCT TTCTGCTGGC CGGGTTCGTG CTGCTCGCCC CCACGACGCT CCTGCAGGGA ATCGTCACCG ACCCGCTGGT GATGACGCTC GTCCGGCTGG CGCAGGGGGT CGCCGTCGCG TGCGTGTTCG CGCCGTCGCT GGCGCTCGCG GGCGACCTCG CGCGGGAGGG CGAGTCCGGC ACGACGCTGT CGGTGCTCAC GATGGGGTTC GGCTTCGGCG TCGCGGTCGG GCCGCTCGCG TCCGGCTGGC TCGTCGGCTT CGGCTTCGTC GTGCCCTTCG CGGTCGGCGC CGCGCTCGCC GTCGTCGCAC TCGTGACTGT CGTGACGCAG GTCGAGGAGA CGCTCGGCGC GGGCGAGGAC GCCGCGGCCG CGGCGACGGC GGACTGA
|
Protein sequence | MGLLSGVADT DRRVIVLALA RMVGAAGNSF LIVVLPLYIA SDLIDIESLL GTAVGVGAAS VTLTEPLLIG VVLSLFGFLN SFSQPLTGRL SDRMGVRRPF VLAGILLLGT ASGLYMIADA YWQLIALRAA QGFGAALIIP ATVALVNEYA ASDADRGGNF GVYNTFRLIG FGFGPVLAGV VVERGPYDLS AIGLPVLDGF DAAFAAACAG AYLSFALVFL LVRDAAKSSE ASDDLSIRVR GEGRLLDPVF ALGLATVAMG ICIALYATLQ TQVNARLDQP PVWFGLQFAA VTIANVLFQV PVGQASDRIG RRPFLLAGFV LLAPTTLLQG IVTDPLVMTL VRLAQGVAVA CVFAPSLALA GDLAREGESG TTLSVLTMGF GFGVAVGPLA SGWLVGFGFV VPFAVGAALA VVALVTVVTQ VEETLGAGED AAAAATAD
|
| |