| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_2429 |
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| Symbol | rps5p |
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| ID | 7400547 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorubrum lacusprofundi ATCC 49239 |
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| Kingdom | Archaea |
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| Replicon accession | NC_012029 |
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| Strand | - |
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| Start bp | 2417169 |
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| End bp | 2417816 |
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| Gene Length | 648 bp |
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| Protein Length | 215 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 643709502 |
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| Product | 30S ribosomal protein S5P |
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| Protein accession | YP_002567074 |
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| Protein GI | 222480837 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0098] Ribosomal protein S5 |
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| TIGRFAM ID | [TIGR01020] ribosomal protein S5(archaeal type)/S2(eukaryote cytosolic type) |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGTAGAC ACAACGACGG CTGGGAACCG CGGACGCGAC TCGGCCGCAA GGTACAGAAC
GGCGACATCT CGTCGATGGA ACAGGCGCTC GATTCCGGCC TCCCGCTGAA GGAGGCGGAA
ATCGTCGACC AGCTCCTCCC GGGGCTGGAA GACGAAGTGC TGGACATCAA CATGGTCCAG
CGGATGACTG ACTCCGGCCG CCGCGTGAAG TTCCGCTGCG TGGTCGCCGT GGGTAACCGC
GACGGCTACC TCGGCTACGC ACAGGCCCGA GACGATCAGG TCGGCGGCGC GATCCAGAAG
GCGATCGATG TCGCGAAGCT GAACATCATC GAAGTCGACC GCGGCTCCGG GTCCTGGGAG
GACCAGCCCG GCGGCACGAA CTCCCTCACC CGCAAGGCCG AGGGGAAGGC CGGCTCCGTC
ACCGTCGAGA TCCAGCCCGC CCCGCAGGGG CTCGGGCTGG CCGCGGCGGA GACAGTCCGC
AACATCTTGG AGCTCGCCGG CGTCGAAGAC GCTTGGACGA ACTCCGACGG CAACACCCGG
ACGACCGTCA ACCTCGCGAA GGCGACGTTC AACGCCTTAG AGAACGCTGC GCAGTCCCGA
ACGCCGCAGC ATGCACGTGA GGTCCACTAC GACGAGGTGA GCGAGTGA
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| Protein sequence | MSRHNDGWEP RTRLGRKVQN GDISSMEQAL DSGLPLKEAE IVDQLLPGLE DEVLDINMVQ
RMTDSGRRVK FRCVVAVGNR DGYLGYAQAR DDQVGGAIQK AIDVAKLNII EVDRGSGSWE
DQPGGTNSLT RKAEGKAGSV TVEIQPAPQG LGLAAAETVR NILELAGVED AWTNSDGNTR
TTVNLAKATF NALENAAQSR TPQHAREVHY DEVSE
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