Gene Hlac_2417 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_2417 
Symbol 
ID7400535 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp2406899 
End bp2408050 
Gene Length1152 bp 
Protein Length383 aa 
Translation table11 
GC content67% 
IMG OID643709490 
ProductFAD-dependent pyridine nucleotide-disulphide oxidoreductase 
Protein accessionYP_002567062 
Protein GI222480825 
COG category[C] Energy production and conversion 
COG ID[COG1252] NADH dehydrogenase, FAD-containing subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.755608 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.657497 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGACC GTATCGCCAT CCTCGGGGGT GGCACGGGCG GAACGGTGCT CGCGAACAAC 
CTCGCGGACC GGCTCGCCCT GGAGATTGAC GCCGGCGACG TCGAGGTGAC GCTGATCAAC
GACGACCCGG ACCACGTGTA CAAGCCGGTG TGGCTGTACG TCCCGTTCGG CCAGCGCGAG
CCCGCCGACG GGCGCCGACC CCTCCGCGAC CTCGTCGACG ACCGGGTCGA CGTCGCGATC
GACCGGGTGA CCGAGATCGA CACAGACGCA AAGGAACTCG CGCTCCGTGA CGGCTCCGGA
CCGCTCGGCT ACGACCACCT CGTCGTCGCG ACGGGCTCGA CGCTCGCCGA CGACGAGATT
CCGGGGCTCG CAGCGGGCGG CCACGACTAC TACTCGGAGT CCGGCGCACT GGCGCTCAGA
GACGAACTCC TCTCGATGAC CGAGGGCCAC CTCGTGTTGA GTGTCGTCGG CACGCCGCAC
ATGTGCCCGG CGGCGCCGCT GGAGTTCGTC TTCATGGCGG ACAGCTGGTT CCGTCAGCGT
GGGCTCCGCG ACGACATCGA GATCACGTAC ACGTACCCGA TCAACCGCGT CCACGGCAAC
CCCCAGATCG GCGAGTGGGC GGACCCGATA ATGGCGGAGC GGGACATCAA CACGGAGACG
TTCTTCAACG CCGAGTCGGT CGACCCGGAC GCGAAGACGA TCACCTCCAT GGAGGGGACG
GAACTCGACT ACGACCTGTT GGCCGCGATC CCGCCACACC GCGGCGTCGA CGTGGTCGAC
GAGGCAGGGC TGGGCGATCG TGGCTGGGTC GACGTGGATA AACACACCTT AGAGGCCGAG
ACGGCAGACA ACGTGTACGC GCTCGGCGAC GCCGCGACGA CCGGCGTCCC GAAGGCGGGA
AGCGTCGCCC ACTATCAGGC AGGCGTCGTG GCACAGCGGC TTGAAAGCGA GATCCGCGGT
CGGCCCGCAA CCGCGACGTA CGACGGAAAG ACGCTCTGTT TCATCGAGAC GGGGATGGAC
GCCGCCTCGT TCGTCGAGTT CGACTACGAG AACCCGCCGT CGCCGGCGCC CCCCCTCCGA
GAAGCTCCAC TGGTCGAAGC TGGCGTACAA CGAGTCCTAC TGGCTCACCG CACGGGGGTT
GCTCTGAGAT GA
 
Protein sequence
MTDRIAILGG GTGGTVLANN LADRLALEID AGDVEVTLIN DDPDHVYKPV WLYVPFGQRE 
PADGRRPLRD LVDDRVDVAI DRVTEIDTDA KELALRDGSG PLGYDHLVVA TGSTLADDEI
PGLAAGGHDY YSESGALALR DELLSMTEGH LVLSVVGTPH MCPAAPLEFV FMADSWFRQR
GLRDDIEITY TYPINRVHGN PQIGEWADPI MAERDINTET FFNAESVDPD AKTITSMEGT
ELDYDLLAAI PPHRGVDVVD EAGLGDRGWV DVDKHTLEAE TADNVYALGD AATTGVPKAG
SVAHYQAGVV AQRLESEIRG RPATATYDGK TLCFIETGMD AASFVEFDYE NPPSPAPPLR
EAPLVEAGVQ RVLLAHRTGV ALR