Gene Hlac_2412 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_2412 
Symbol 
ID7400530 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp2403604 
End bp2404119 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content62% 
IMG OID643709485 
Productcytochrome c oxidase subunit II 
Protein accessionYP_002567057 
Protein GI222480820 
COG category[C] Energy production and conversion 
COG ID[COG1622] Heme/copper-type cytochrome/quinol oxidases, subunit 2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACATTC ACGCCTACGA GAAGATCTGG CTCGCGGTAT CGGTGCTCCT GATACTGTTC 
CTCATCGGGT CGGTCACGTA CGGCGCCGTC GGTCCCGGCG TCGCGATGGT GAGCGACACC
GAACCGGCGA TCGATTCCGG CGGGCTCGAC GAGGACGAGC GGTTCTCGGA GCCCCGTGTC
GAACAGGTCG GTGAAAACGA GTACGCGGCG TACGTCGTCG CCCGTCAGTT CACCTTCCAG
CCCGACCCGA TCGTCGTGCC AGCGAACAGC ACCGTGACGT TCTACGTCAC CTCCGCGGAC
GTGATCCACG GCTTCGAGGT CGTCGGAACG AACGCCAACG CGATGGTCGT TCCCGGCGAA
GTCTCTGAGC TCACCGTCAA AGTCGAAGAA CCGCAGGAGT ACGGCCTCAT CTGCAACGAG
TACTGCGGCG CCGGTCACCA CGTTATGGAA GGAAAAGTCA ACGTCGTCAG TCAGGCGGAG
TACGAGGATC GAACCAGCGG AGGTGATGGC GAATGA
 
Protein sequence
MHIHAYEKIW LAVSVLLILF LIGSVTYGAV GPGVAMVSDT EPAIDSGGLD EDERFSEPRV 
EQVGENEYAA YVVARQFTFQ PDPIVVPANS TVTFYVTSAD VIHGFEVVGT NANAMVVPGE
VSELTVKVEE PQEYGLICNE YCGAGHHVME GKVNVVSQAE YEDRTSGGDG E