| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_2387 |
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| Symbol | |
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| ID | 7400505 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorubrum lacusprofundi ATCC 49239 |
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| Kingdom | Archaea |
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| Replicon accession | NC_012029 |
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| Strand | + |
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| Start bp | 2382054 |
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| End bp | 2383757 |
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| Gene Length | 1704 bp |
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| Protein Length | 567 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 643709460 |
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| Product | lysyl-tRNA synthetase |
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| Protein accession | YP_002567032 |
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| Protein GI | 222480795 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1384] Lysyl-tRNA synthetase (class I) |
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| TIGRFAM ID | [TIGR00467] lysyl-tRNA synthetase, archaeal and spirochete |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.353183 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCCG ACGACTCCCC GCACATCCTC TCGGAACAGG CGCGAGACAC GGACGGATCG
GCGGGCGACG ACGACGAGGG GGACGACGGC AAGGGGTTCC GCGCCTTCTG GGCTGACGTG
GTCGCCGACG AGATCGAGGC GCGCGACCCG GACGAGCCGA TCGTGATCAA GGGCGGCGTC
TCTCCTTCGG GGGTCGCACA CCTCGGCAAC TTCAACGAGA TCATGCGAGG GTACTTCGTC
GCGGCGGTGT TGCGCGAGCG CGGCCACGAA GTCCGGCAGG TGTTCACCTC CGACGACAAG
GACCCGCTCC GCAAGATCCC GCGGAAGCTG GCGAACCCCG ACGGGGAGAT CGTGGGGCTC
GGCGAGGTCG ACGCGGGCGC GCTCGGCCGG AACCTCGGGA AGCCGTACAC CGCGATTCCG
GACCCGTTCG GCGAGCGCGA CTCGTACGCC GCCCACTTCG CCGCCCTGTT GAAGGCCGAT
GCCGACCGAT TGGAGATTCC GGTCGAGATG GTCTCGAACA CGGAGCTGTA CGCCGACGGC
GCCTTCGACG ACGTGACTCG GAGGGTCCTC TCTGACCTTG ACGGCGTTCG CGAGGTGCTC
TCGCAGTATC AGGACAAGGT CGACGGCGAG TACGTCCCGT TCAATCCGGT GTGTGGCGAG
TGCGGGAAGA TCACGGAGAC GGTCACGAGC GTCGACCTCG ACGCCGAGAC TGTCGAGTAC
GTCTGTACCG ACATGGACGT CGGCGACAAT ACCATCGAAG GGTGCGGCCA CGAGGGGACT
GCCACGTTCC GCGAGGGGAA GCTCCCGTGG CGGCTGGAGT GGCCCGGCCA ATGGGACGTG
CTCGGCGTCG ACTTCGAGCC GTTCGGCAAG GACCACGCGG AGGGGTCATG GCCCTCCGGC
GTCGACGTGG CGCGGAACGT CCTCGGAATC GAGCCGCCGG TGCCGATGGT GTACGAGTGG
TTCACGCTCA ACGGCGAGCC GCTCTCCTCG TCGGCCGGCA ACATCGTCAC CGTCTCGGAA
CTGCTCGACC TGCTCGAACC CGCGGTGCTC CGGTACTTCT TCGCGCTCCA CCCGAAGAAG
GCACGCGACC TCGACATCGA ACGACTCGAC CAGCTCGTCG ACCGGTTCGA CCGGTTCGAG
CGCGCGTACT TCGGCGAGGT CGACGACGAG GATCTGACCG CCTTCGCCGA GCGCGCCTAC
CCGTTCGTCG TTAGGCGCGC GGACGACCCG CCCACCGAGA AGCCCGTGCG GCTCCCGTAC
ACCTTCGCGG CGGTCCTCGG GATGGTCGAC GACCCAGCGT TCCGGGAGCG ACTCGCCCGT
GACGAGGGAC ACATCCCCGA CGACGCCTCC GACGAGACCG TCGAAGCCGC GCTAGCCCGC
GTCGAGAAGG CGCGCAACTG GGCGGAGCGC ACCGCTAACG AGTACGACTA CCGGCTCCAG
ACGGAGTTGC CCGACGCCGA CTTCGACGAC GATGTTGCGG CTGCGCTCGA CGACCTCGCG
GAGTTCGTCG CGGCCGGCCA CGACGGCGAG GCGATCCAAG CGGAGATATA CGAGACGGCG
CGCGCACACG ACGTTGAGGT GAGCGACTTC TTCGCCGCGG GCTACCGGCT CTTCTTCGAC
GACACGCAGG GGCCGCGGCT CGGCGAGTTC CTCGGCGAGT TGGAGCGTGA CTACGTCGTG
GCACGGCTCC GCCGGGAGGC GTAG
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| Protein sequence | MSADDSPHIL SEQARDTDGS AGDDDEGDDG KGFRAFWADV VADEIEARDP DEPIVIKGGV
SPSGVAHLGN FNEIMRGYFV AAVLRERGHE VRQVFTSDDK DPLRKIPRKL ANPDGEIVGL
GEVDAGALGR NLGKPYTAIP DPFGERDSYA AHFAALLKAD ADRLEIPVEM VSNTELYADG
AFDDVTRRVL SDLDGVREVL SQYQDKVDGE YVPFNPVCGE CGKITETVTS VDLDAETVEY
VCTDMDVGDN TIEGCGHEGT ATFREGKLPW RLEWPGQWDV LGVDFEPFGK DHAEGSWPSG
VDVARNVLGI EPPVPMVYEW FTLNGEPLSS SAGNIVTVSE LLDLLEPAVL RYFFALHPKK
ARDLDIERLD QLVDRFDRFE RAYFGEVDDE DLTAFAERAY PFVVRRADDP PTEKPVRLPY
TFAAVLGMVD DPAFRERLAR DEGHIPDDAS DETVEAALAR VEKARNWAER TANEYDYRLQ
TELPDADFDD DVAAALDDLA EFVAAGHDGE AIQAEIYETA RAHDVEVSDF FAAGYRLFFD
DTQGPRLGEF LGELERDYVV ARLRREA
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