Gene Hlac_2337 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_2337 
Symbol 
ID7401954 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp2335502 
End bp2336149 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content73% 
IMG OID643709410 
Productprotein of unknown function DUF447 
Protein accessionYP_002566983 
Protein GI222480746 
COG category[S] Function unknown 
COG ID[COG2457] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0425454 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.12878 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGACG ACAGCACCGC TTCCGGCCCC GACGGCTGGC CGGTCGCCCT CCGGGGCGTC 
ACCGAGTCGA TCGTGACGAC GCTCGGGCCG AACGACCGCT GGAACGTCGC GGCGCTCGGG
CTCCACGCGC CGGACGATCC GAGCGACCCC GTCACCGCGC GGACGTACGG GCGCACCCGA
ACGTGGCGGA ACTTCACCGA GCGCGGGGGC GGCGTCGTGC AGTTCACGAG CGACCCGCGG
ACGTTCGTCG ACGCCGCGCT GACGGTCCGC GAGGTCGACG ACCCGGTGCT GCCGACCGCC
GACGCGTGGG TCGAGGTGAC CGTCGAGGAG GTCGCGAGCG AGACCGAGGG CGACACGACG
ATCCGAACGT GGGCGCTCGA TCCGGTCGAG CACGCGGTCG TGAGAGAGCG CGTTCCGACA
ATAAACCGGG GATTCAGCGC GGTCATCGAC GCGACGGTGG CCGCCTCGCG GCTGGACGTG
CCGGGGTTCG ACACGGCGGA ACTCCTCGAC CGACTACGCT ACTTCGCGGA CGTTGTCGAG
CGGTGCGGCG GCCCAGCCGA GCGCGAGGCG TTCGCCAGAA TCGACGAGGC GACCGGGTGG
CGGGAGCGGG CGGGGGGCGC AACGGGGGCG GGGGACGACG AGGAGTAA
 
Protein sequence
MSDDSTASGP DGWPVALRGV TESIVTTLGP NDRWNVAALG LHAPDDPSDP VTARTYGRTR 
TWRNFTERGG GVVQFTSDPR TFVDAALTVR EVDDPVLPTA DAWVEVTVEE VASETEGDTT
IRTWALDPVE HAVVRERVPT INRGFSAVID ATVAASRLDV PGFDTAELLD RLRYFADVVE
RCGGPAEREA FARIDEATGW RERAGGATGA GDDEE