| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_2329 |
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| Symbol | |
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| ID | 7401946 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorubrum lacusprofundi ATCC 49239 |
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| Kingdom | Archaea |
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| Replicon accession | NC_012029 |
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| Strand | - |
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| Start bp | 2326021 |
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| End bp | 2327070 |
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| Gene Length | 1050 bp |
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| Protein Length | 349 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 643709402 |
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| Product | TRAP transporter solute receptor, TAXI family |
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| Protein accession | YP_002566975 |
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| Protein GI | 222480738 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2358] TRAP-type uncharacterized transport system, periplasmic component |
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| TIGRFAM ID | [TIGR02122] TRAP transporter solute receptor, TAXI family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.809783 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTTCAC ACCAAACACG ACGTAGATTC CTCGAAGCGA CCGGTGTCGC TGGCGTGGCC
GCACTTGCCG GCTGTAGCGG AAACGGCGGC GATGGCAGCG ACGGAAGCGA CGGAAGCGAC
GGAAGCGACG GTAGTGACGG AAGCGATGGC AGTGACGGAA GCGATGGCAG CGACGGAAGC
GATGGCGGCG ACGGCGAGAC GCGCCTGACC TGGCACGCGG GCGGGACCGG CGGGACCTAC
TTCCCCCTCT CGAACGAGAT CAAGACCATC GTCGACGCCA ACACCGACTT CACGCTGAAC
GTCCAGTCCA CGGGCGCGAG CGTCGAGAAC GTCGGCAGCC TCGCCGACGG GTCGGCCGAC
TTCGCGCTGA TCCAGAACGA CATCGCCTCG TTCGCGAGGA ACGGTACGGG CATCGACGCC
TTCATCGACA ATCCGATCGA GAACCTTCGG GGCGTCGCGA CGCTGTACCC GGAGACGATC
ACGCTCGTCA CGCTGGCGGA GAACGACATC TCCTCGGTCG ACGACCTCAG CGGCGCGACG
ATCAACACCG GCGACCTCGG GTCGGGGACG CAGGTTAACG CGGTACAGAT CCTGGACTCG
CTCGGAGTCA CCGACTACAA CGAGCAGAAC GCCGGCTTCT CGCAGGCGTC CGAACAGCTC
GCCAACGGCG ACATCGACGC GGCATTCGTC GTCGGCGGCT GGCCGGTCGG CGCGATCGAG
GAGCTCGCGA ACACGAACGA CATCGAGATC GTTCCGATCG GCGGCGACAG CCGCGAGGCC
GTCAAGGAGG ACGCCTCCTG GTTCGCGGAC GACACCATCC CCGGCGGCAC GTATAGCGGA
ATCGATGAAG ACGTCGAGAC GGTCGCCGTG CAGGCGATGA TCGCCACGAA CGCCGAGGTG
CCGGACGAAA CCGTCCGGAC GGTCACCGCG GCCATCTTCG ATAACCTCGA CGAGCTCTCG
ATCAAGACCG AGTTTATCAC CGTCGACACC GCACAGGACG GGATGTCCAT CGAGCTCCAC
GACGGCGCCG CGGCCTACTT CGACGCGTAG
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| Protein sequence | MSSHQTRRRF LEATGVAGVA ALAGCSGNGG DGSDGSDGSD GSDGSDGSDG SDGSDGSDGS
DGGDGETRLT WHAGGTGGTY FPLSNEIKTI VDANTDFTLN VQSTGASVEN VGSLADGSAD
FALIQNDIAS FARNGTGIDA FIDNPIENLR GVATLYPETI TLVTLAENDI SSVDDLSGAT
INTGDLGSGT QVNAVQILDS LGVTDYNEQN AGFSQASEQL ANGDIDAAFV VGGWPVGAIE
ELANTNDIEI VPIGGDSREA VKEDASWFAD DTIPGGTYSG IDEDVETVAV QAMIATNAEV
PDETVRTVTA AIFDNLDELS IKTEFITVDT AQDGMSIELH DGAAAYFDA
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