Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hlac_2327 |
Symbol | |
ID | 7401944 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorubrum lacusprofundi ATCC 49239 |
Kingdom | Archaea |
Replicon accession | NC_012029 |
Strand | - |
Start bp | 2322485 |
End bp | 2325343 |
Gene Length | 2859 bp |
Protein Length | 952 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 643709400 |
Product | TRAP transporter, 4TM/12TM fusion protein |
Protein accession | YP_002566973 |
Protein GI | 222480736 |
COG category | [R] General function prediction only |
COG ID | [COG4666] TRAP-type uncharacterized transport system, fused permease components |
TIGRFAM ID | [TIGR02123] TRAP transporter, 4TM/12TM fusion protein |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.648289 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCACGA CCAATCGAAC CGACGGCGGT ATCGACGACT CGAACGACGG CGGCTCCGGA GGGCCACCCC CCGGCGACCT CGGCAGCGGT TCGGGCGCGG ACGAGCCGCC GGACGACAGG ACGGACGAGG AGATCTCCCG CGAGGAGGCG GACGATCTGA TAGAGGAGAT CGAGCGCCGC CGCTCGCTGC GGGGACCAGC CGCGATAGCG GTCGCGATCA TCGGAATCGC GTTTTCCGTC TTCCAGTTAT TCCTCGCCGC CCGGAGCTAC ACGTTCACGA TCTGGCTCCC GACCGTCGAT ATCGCGGGGA TCTCGATCGC CCCCTGGCAG GTCTCGCTCC AGCTCCTGCA GGCGAACGCG ATCCACGTCG CCTTCGCGCT CGTGCTCACC TTCCTACTGT TCCCGGTGAG CACCGGCGAC GGGATGGTCA CGCGGAATTT CGGTCGGATC GCCCCGGCGG CGTCGCAGCG CCTCGGCGAC CGGAGTCCTG TCACGCGGGC GCTCGAAGGA GGTCGGACGG GGCTTCGCTG GGCGTTCCTC GACCCCGACC GCGAGCGGGT GACTCCGGTC GACATACTGT TCATCGCCGT GGCGTTCCTC TCGGCGTTCT ACTTCATGAC GGAGTTCGCG GAGATCCAGA ACATGCGCGT CTTCGGGGTC GACTCGGGGC GGCCGGTTAC CGAGGTGTAC GCGTTCCTCC AGCCCCTGCT CGGCGGCGTC CCGTTCGTGA GCGAGTACTC CTACGCGATG ATTCTGGGCG TGGCCGGCAT CCTGCTGGTG TTGGAGGCCA CCCGCCGGAC GCTCGGCCTC CCGCTGATGC TCATCGTCGC CACGTTCATC GTCTACGCCC GCTGGGGCTA CCTCATCAGT GGGGACACCC CGTTCCTCGG CCTGCTCGCG ATCCCGCCGC TCTCCTGGCC GGATATCGTT CAGAACCTCT GGTACAACAC CGAGAACGGG GTGTTCGGTA TTCCGGTGAC GGTGTCGATG AGCTTCATCT ACATCTTCAT CCTGTTCGGC TCGTTCCTCG AGATGAGCGG GGCCGGCCAG TGGTTCATCG ACCTCGCGTA CGGGCTCACC GGGGATCGTA AAGGCGGCCC GGCGAAGGCG AGCATCCTCG CCAGCGGGTT CATGGGAACG ATCTCGGGGT CGTCGATCGC CAACACGGTC ACGACCGGCG CGTTCACGAT CCCGCTGATG AAGCGGTCGG GCTACGATCC CGAGTTCTCC GGCGCCGTCG AGGCGTCCGC GTCGTCCGGC GGGCAGATCC TCCCGCCCGT GATGGGGGCG GCCGCCTTCC TGATGGTCCA GTACACGTCG ACGCCGTTCG CCGACATCAT CATCATCGCG ACGATCCCGG CGATCGTCTT CTTCTTCGGC GTCTGGGTGA TGGTCCACCT CAAGGCGGTC CAAGAGGGGA TCGGCGGCGT CTCCGGCGAG GACACGGTTA ACTTCTGGGA CCACTTCAAA CGCGGCTGGT TCTACCTCGT GCCGATCGCA CTGCTCCTGT ACTACCTCAT CATCGAGCGG CTCTCGGTCT CCCGGTCGGC GTGGTTCACG ATCGTGGCGC TCGTGGCGCT GGTCGCGCTC GTCTCGGCGT ACAGCGAGGA GACGCGGCTG CGCCTCTTCG CCGTCTTCGC GGCGATCGTC GGCGTCGAGT TCGCGAGCCA CGCGCTGGCC GGCGTGAACG TCGTCGGCCT CGTCACCGGA GCCGGCGGTG CGGGGCTCCC GCCCGGCGAG GCGTTCAGCG CCATACTTGC GGGGATCGAG TGGTACGCAA TGCTCGCCGG GGTGCTCACG CTGCTGTCCA AGCCCGATCT CGACGCGTCG CTGCTCGAGC TCAACCCCTC GGTTCAAGAC ACGGCCGAGA CGATCGGCGA CCGGACCGAC CGGGACTTAG AGAACAGCCA GCCGTTCAAA CTCGGCACCT TCGTGGTCAC GTCGATGGAG CAGGGCGCGC GCACCGCGGT CCCGGTCGTG GTCGCGGTCG CGGCCGCGGG GATCATCCCC GGCGTCATCA GCGTCTCCGG GCTCGGCCCT AACCTGACCT CGCTGCTGTT AGCGCTCTCT GGGGGGTCGA TCGTGATCAT GCTGCTCGTG ACGGCCGTCT CGAGCATCAT CCTCGGGATG GGAATGCCCA CGACGGTCAC CTACATCATC CTCATCTCGA TGCTCGCGAC GCCGCTCGTG GAGTTCGGTA TCCCGCTTCT GGCCGCCCAC CTGTTCATCC TCTACTTCGG CGTGATCGCC GACATCACGC CGCCGGTGGC CGTGGCGGCG TACGCCGCCA GCGGGATCGC CAAGTCCGAT CCCTTCGAGA CCGGCGTGAA GGCGTTCTCG CTGTCGCTGA ACAAGGCGAT CGTCCCCTTC GCGTTCGTGC TCGCGCCGGG GATCGTCCTG CTGCGCGAGA AGGCGAACGC CGCCGACCTG CCGATCCGCG AACAGTACCG CGTGGTCGGG TTCGCGGACC TCGCCGAGCT GTCCTACTCG GTCCCCGAGA TTCTCATCCC CATCGCCGGG GTCTTCCTCG GCGTGATCGC GCTCGGCGCG ACCGTCATCG GGACACTGTA CACGCGTGTC GGCCGGCTCA GTCGGGCCGT GTTCGCCCTC AGCTCGCTGC TGTTGATGGC GCCGGGGCTG CTCTCCGAGA GCGTCTTCGA CACGCTCGGG CTCGTTGGCG TGAGTGTCTC CGTCAACGCG CTCCTGCTTG ATTTGACCCT ACGCGCGGTC GGGTTCGTCC TGTTCGTGCT GTTCGCGCTC CGGAACCGAC GGACGCTCGA CGGCGAGGGC GACGGAGCGG GAGAGACCGA CGCGACAACG GGATCGACCG AGGCCGTCGC CGCCTCCGAC TCGTCCTGA
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Protein sequence | MTTTNRTDGG IDDSNDGGSG GPPPGDLGSG SGADEPPDDR TDEEISREEA DDLIEEIERR RSLRGPAAIA VAIIGIAFSV FQLFLAARSY TFTIWLPTVD IAGISIAPWQ VSLQLLQANA IHVAFALVLT FLLFPVSTGD GMVTRNFGRI APAASQRLGD RSPVTRALEG GRTGLRWAFL DPDRERVTPV DILFIAVAFL SAFYFMTEFA EIQNMRVFGV DSGRPVTEVY AFLQPLLGGV PFVSEYSYAM ILGVAGILLV LEATRRTLGL PLMLIVATFI VYARWGYLIS GDTPFLGLLA IPPLSWPDIV QNLWYNTENG VFGIPVTVSM SFIYIFILFG SFLEMSGAGQ WFIDLAYGLT GDRKGGPAKA SILASGFMGT ISGSSIANTV TTGAFTIPLM KRSGYDPEFS GAVEASASSG GQILPPVMGA AAFLMVQYTS TPFADIIIIA TIPAIVFFFG VWVMVHLKAV QEGIGGVSGE DTVNFWDHFK RGWFYLVPIA LLLYYLIIER LSVSRSAWFT IVALVALVAL VSAYSEETRL RLFAVFAAIV GVEFASHALA GVNVVGLVTG AGGAGLPPGE AFSAILAGIE WYAMLAGVLT LLSKPDLDAS LLELNPSVQD TAETIGDRTD RDLENSQPFK LGTFVVTSME QGARTAVPVV VAVAAAGIIP GVISVSGLGP NLTSLLLALS GGSIVIMLLV TAVSSIILGM GMPTTVTYII LISMLATPLV EFGIPLLAAH LFILYFGVIA DITPPVAVAA YAASGIAKSD PFETGVKAFS LSLNKAIVPF AFVLAPGIVL LREKANAADL PIREQYRVVG FADLAELSYS VPEILIPIAG VFLGVIALGA TVIGTLYTRV GRLSRAVFAL SSLLLMAPGL LSESVFDTLG LVGVSVSVNA LLLDLTLRAV GFVLFVLFAL RNRRTLDGEG DGAGETDATT GSTEAVAASD SS
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