| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_2263 |
|---|
| Symbol | |
|---|
| ID | 7399973 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorubrum lacusprofundi ATCC 49239 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_012029 |
|---|
| Strand | + |
|---|
| Start bp | 2249918 |
|---|
| End bp | 2252143 |
|---|
| Gene Length | 2226 bp |
|---|
| Protein Length | 741 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 643709336 |
|---|
| Product | CheA signal transduction histidine kinase |
|---|
| Protein accession | YP_002566909 |
|---|
| Protein GI | 222480672 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0643] Chemotaxis protein histidine kinase and related kinases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.0131466 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACTCGC ACCGCGCCGC GTTCGTCGCC GAGGCGGAAG ACGGGATCAC CGACCTGAAC
AACGCTCTCC TCGCCTTGGA GGCCGACCCC GAGGACGCCG AGGCGATGGA CGACGTGTTC
CGCGTCGCCC ACACGCTGAA GGGCAACGCC GCGGCGATGG GCTACGAAGG CGTCTCCGAC
TTCGGACACG CCCTCGAAGA CCTGCTCGAC GCGGTCCGGC AGGGCGACCG CGAGGTGACG
CCCGAGCTGA TGGACCTGCT CTTCGAGGGG GTCGACACCG TCGAGGCGAT GGTGTCGGAG
ATCGCCGACA CGGGCGACGT GTCGACCGAC CCCTCCGATC TGGAGGGCCG CCTCCGCGAG
ATGGAGGAAC ACGGGACCGT CGGCGGCGAG GACGGAGACG GCGACGCCGA CTCCGGTACC
GACGCCAGCG ATGCCGACGA TGCTGACGCA GACGGCGGCG ACGAGGACGG TGGCGTCAAC
GAGGCCTCCG CCGATGAGGA CCCCGAGAGC AGCGAGGACG ACGCGGAGGA TATCTCTGTC
CCCGAACTCC CCGACGCGGC GGCCGCCCTC GACGACCCGG TCGTGTACGC AGACGTGACG
ATCGGCGAGG CCGCGATGGC GGGCGTCGAC GCGGCGCTCG TGTTGCAGGC GCTCGACGGT
CAGTTCGGCG AGTACGTCAC GGTTCCCGGC CCCGAAGCGC TGGAAGACGG AGAGTACGAC
GAGCGGTTCG ACGTCTTCGT CGCCGACGCC GACCCCGGGG TCGTCGCCGA GGGGCTTGGC
GCGCTCACGC AGGTCGAGTC GATCGCGACG GGCCTCGTCG AAGATGGCGA AGATGGCGAA
GATGTCGAAC ATGGCGAACA TGGCGAAGAT GGCGAAGATG GCGAAGATGG CGACGCAGTC
GACGACGGCT CCGAAGCGGC TGTAGGTGTC GGCGGTGCCG ACGACGCAGA CGATGCGAAC
GAGAGCGCCA AAGACGACTC CTCGTCCAAC TCCAAATCCG ACTCTAACTC CGGTGACGAG
ATCAAGTCCA TCCGGGTCGA CGTCGATCAG GTCGACGAGC TGTACGGGCT CGTCGAGCAG
CTGGTGACGA GCCGGATCAA GCTCCGGCGG GAACTGGAGG CGACCGACGC TCAGTCGGAC
ACCTTAGACG AGCTCGATAA GCTCGCGTCC AGCCTGCAGG ACACGGCGAT GGACATGCGC
CTTATTCCGT TCTCGCAGGT GTCGGACTCG TTCCCGCGGC TCGTCCGCGA CATCTCGCGA
GACCTGGGCA AGCGGATCGA CTTCGAGATC GAGGGTGACG ACGTGGAACT CGACCGAACC
ATCCTCACGG AGATGCGCGA CCCGCTCGTC CACGTCCTGC GGAACGCGGT CGACCACGGG
ATCGAGACCC CCGAGGAGCG CGAGGTCGCC GGGAAAGAGC CGACTGGACA CGTCAGACTC
ACGGCCGAAC GCGAGCGCGA CCACGTCATC ATCGAGGTGG CCGACGACGG CGGGGGGCTC
GATCCCGACC AGCTCCGCGA GAAGGCGGTC GACGAGGGCG TCAAGAGCCG CGAGGCGGTC
GAGGCGATGG AGAACGAGGA GGTGTACGAC CTCGTCTTCC ACCCCGGCTT CTCCACCGCG
GAGGAGGTGA CCGACGTCTC CGGGCGCGGC GTTGGGATGG ACGTGGTCCG GACGACCGCC
CGCGACCTCG ACGGCTCCGT CTCAGTCGAG AGTGAACCGG GCGAGGGAAC AACGGTCCAG
TTCCGGCTCC CGGTCACCGT CGCCATCGTG AAGGTGATGT TCGTCGACGT GGGCGGCACG
GAGTACGGGA TCCCGATCAA GTCGATCGCC GAGGTCGCCC GCGCGGACGA TGTAGAAGAG
GTCCACGGCG ACGAGATCGT CCGCCACGAG GACGATCTCT ACCCCGTGAT CCGACTGAAC
GAGCGGCTCG CGAACGGCGG CGCTACGGCG GCCGGGCCGG GAGACGACGA TCCCACAGAC
GGCGACGCCG CCGGAGGTGA CGCCGCGGCC GCGACGACCG ACGGCGGCGT GACCGACGAG
GGGATGCTCG TGCGGATCCG GGAGGAGACG CGGCAGGTTG CGCTCCACTG CGACGCCGTG
CTCGATCAGG AGGAAGTGGT CGTGAAACCG CTCGATGGGC CGTTGTCGGG AACACCGGGG
CTCAGCGGCA CGGCGGTCCT CGGCGATGGC GATGTCGTGG CCGTCCTCGA CGTGGTGAGC
CTATGA
|
|---|
| Protein sequence | MDSHRAAFVA EAEDGITDLN NALLALEADP EDAEAMDDVF RVAHTLKGNA AAMGYEGVSD
FGHALEDLLD AVRQGDREVT PELMDLLFEG VDTVEAMVSE IADTGDVSTD PSDLEGRLRE
MEEHGTVGGE DGDGDADSGT DASDADDADA DGGDEDGGVN EASADEDPES SEDDAEDISV
PELPDAAAAL DDPVVYADVT IGEAAMAGVD AALVLQALDG QFGEYVTVPG PEALEDGEYD
ERFDVFVADA DPGVVAEGLG ALTQVESIAT GLVEDGEDGE DVEHGEHGED GEDGEDGDAV
DDGSEAAVGV GGADDADDAN ESAKDDSSSN SKSDSNSGDE IKSIRVDVDQ VDELYGLVEQ
LVTSRIKLRR ELEATDAQSD TLDELDKLAS SLQDTAMDMR LIPFSQVSDS FPRLVRDISR
DLGKRIDFEI EGDDVELDRT ILTEMRDPLV HVLRNAVDHG IETPEEREVA GKEPTGHVRL
TAERERDHVI IEVADDGGGL DPDQLREKAV DEGVKSREAV EAMENEEVYD LVFHPGFSTA
EEVTDVSGRG VGMDVVRTTA RDLDGSVSVE SEPGEGTTVQ FRLPVTVAIV KVMFVDVGGT
EYGIPIKSIA EVARADDVEE VHGDEIVRHE DDLYPVIRLN ERLANGGATA AGPGDDDPTD
GDAAGGDAAA ATTDGGVTDE GMLVRIREET RQVALHCDAV LDQEEVVVKP LDGPLSGTPG
LSGTAVLGDG DVVAVLDVVS L
|
|---|
| |