Gene Hlac_2230 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_2230 
Symbol 
ID7399938 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp2215473 
End bp2216807 
Gene Length1335 bp 
Protein Length444 aa 
Translation table11 
GC content70% 
IMG OID643709302 
Producthypothetical protein 
Protein accessionYP_002566877 
Protein GI222480640 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.576927 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCTTC CCGAACTGCT CGCGGGGACC GTCGGCGACG AGGAGGTCGT GGCCGAGGTC 
CCGCTCGGGG GAGCCGACCG ACTCGCGGTC ACGCCGACGC GGACGCTCGT CTATCGCGGC
GACGGCCTGC TGTCGGACGA GTCGGTCGCG GAGTACTCCC ACGACGTCGA GCGCATCGCG
GTCTCGACGG GTCGCCGCAA GGCGAAACTC ACCCTCGGCT ACGGCCTCAA CGGCGACGAG
ACAATCTCGG TACCGACCAA ACGCGCCGAC GACGTGCTCC ACCCGGTCCT CGCGGGCGTC
CTCTCCGCGA CGGGCGTCAC CGATCCCGGC GAGTCCGTCA TCCAAACCTT CCGCTTCTCC
GAGCTCACGC TCGTCGTCAC CAGCGAGCGG CTCGTCAAAC ACGTCGGCTC CGCGGTCTGG
GACGAGGAGT TCGAGGAGTT CGCCTACGCC GACATCACCG ACCTCGACTT CGAGGAGGGG
ACCGTTGCAA CCGCGGTCGT GTTGACCCAC GGCGGGCGCT CCGAGCGGTT TAAAGCCCCC
AACGAGTCCG CCCGGGCCGT CCGGGAGACG CTCGTCGACG CCGTCTGCGC GTACCACGGC
GTCGACAGCC TCGAAGAGTT CCGCGTGACC GTCGCCGATC AGGGCGACGA CGATAGCGGG
GGTGTAGCCG CCGGAGACGA CGGCGGGAGC ACCACCGACT TCGGTGAAGG GCCCGACCCG
CTGTCGGCCT CGCCGGTCGC TGACGCGGAA GCCGAAGCGG AGGCGGGGAC CGAGGGCGAG
TCGGCGCCGA ACGCGGAGTC GGGAGGCGAG ACGATGGCCA ACGAGCGGCT GACGCGCGGC
GGAGGGTCAG CCTCGTCGGT CGCGGAAGAC ACCGAGACCG CTCCGAACGC GGAGTCCGTC
AAGGAGCCCG TCGACGGCCA CGCGGTCGAC GCCAACGATC CGCTCTCAGA CGATCCGCTC
GCCGACGATC CGCTCTCAGA CGACCAGAAC GCGGATCCGG CTTCGGGTCG GGCCGTCGAC
GCCGATCCGA CGGCGCGGTC CGAGACCGAC TTCGCGAGCG ACGCCACGGG CGAGGCGACG
GGGGAGGAGA TCGCTCCGAC CGACGCGACC GAATCCCAAG ACACGACCGC GCCGGCCGAC
CACGTCGACC ACGCCGATCC GGTCGACGCA GACGCCTTCG ACGGCTCGCC GTTCGAGAGC
GCCGGCGTTG AGGGTGAGGA CCTCGCGACG GAGGTAGCCG AACTGCGTCA CACTGTCGAA
CAGCAGTCTG AACGCCTCGA CAGACAGTCC GCGCTCATCG AACAGCTGAT CGAGGAGCTC
CGGCGCGGTC GCTGA
 
Protein sequence
MSLPELLAGT VGDEEVVAEV PLGGADRLAV TPTRTLVYRG DGLLSDESVA EYSHDVERIA 
VSTGRRKAKL TLGYGLNGDE TISVPTKRAD DVLHPVLAGV LSATGVTDPG ESVIQTFRFS
ELTLVVTSER LVKHVGSAVW DEEFEEFAYA DITDLDFEEG TVATAVVLTH GGRSERFKAP
NESARAVRET LVDAVCAYHG VDSLEEFRVT VADQGDDDSG GVAAGDDGGS TTDFGEGPDP
LSASPVADAE AEAEAGTEGE SAPNAESGGE TMANERLTRG GGSASSVAED TETAPNAESV
KEPVDGHAVD ANDPLSDDPL ADDPLSDDQN ADPASGRAVD ADPTARSETD FASDATGEAT
GEEIAPTDAT ESQDTTAPAD HVDHADPVDA DAFDGSPFES AGVEGEDLAT EVAELRHTVE
QQSERLDRQS ALIEQLIEEL RRGR