| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_2213 |
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| Symbol | |
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| ID | 7401148 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorubrum lacusprofundi ATCC 49239 |
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| Kingdom | Archaea |
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| Replicon accession | NC_012029 |
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| Strand | + |
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| Start bp | 2196896 |
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| End bp | 2198830 |
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| Gene Length | 1935 bp |
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| Protein Length | 644 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 643709285 |
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| Product | helicase c2 |
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| Protein accession | YP_002566860 |
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| Protein GI | 222480623 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG1199] Rad3-related DNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.23708 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCAGTCG TGGACCCCGA TCGGATCCCC GCCGAGTTCC CCGCCCCGAG CTTTCGAGGG
GCACAGGAGC AGGCGCTCGC GGACATCCGC GACGCGTTCG CCGCCGACAA CGATGTGGTG
TTGGTGCGTG CGCCGACCGG CAGCGGCAAG TCCCTGCTCG CGCGGGCCAT CATGGGCGCG
TCGGCCACCG TCGACGAGAC GGCCCCGAGC GAGGCGACCG GCGCCTACTA CACGACCCCG
CAGGTGTCGC AGATCGACGA CGTAGAGGCG GATGACCTGC TCGACGACTT GGCGGTCATT
CGGGGAAAAT CGAACTACGA CTGCATCCTC CCCGGCGAGC ACGACACGCC GGTCAACCGC
GCCCCCTGCG TCCGTCAGCA GGGGTTCGAC TGCTCCGTGA AACACCGGTG TCCGTACTTC
TCCGACCGCG CCATCGCCTC CGGGAACCGC TACGCCGCCA TGACCCTCGC GTACTTCATG
CGGACCGCCG GCTCGGAGGT GTTCCGCAAG CGCGACGTGG TCGTGATCGA CGAGGCCCAC
GGGCTCGCGG AGTGGGCGGA GATGTACGCG ACGATCGAGC TCTCGCCCGG CCGCGTGCCG
GTGTGGGACG AGGTTGGCGT CCCCGACGTG GCGGCCGACG CCGGCCCCGA GGAGGATGCG
CTCGACCGCA CCGCCCGATT CGCCGCGTCG CTTCGCGACA CCGCCAAGCG GGCGAAAGAC
GAGCTGACCG GCCGGCCAGA GCTCGACCGC GAGGAGGTCG CACGCCGGGA CCGCCTGCAG
GAGCTTATCT CGGAGCTCGG CTGGTTCTTA GAGGACTACC GCGACTCGCA GTCGCCGACG
ACGTGGGTCG TCGACCAGCC CGACGGCGAG GGATCTGCGC TCGCGATCAA GCCGCTGGAC
CCGGCCCGCT ACCTCCAACA CACCGTGTGG GACCGTGGGA ACAAATTCGC GCTGCTGTCC
GCCACCATCC TCTCGAAGGA GGCGTTCTGC CGCGGAGTCG GTCTCAACCC CGCGAACGTC
GCCCTCGTCG ACGTCGAGCA CACGTTCCCG CTCTCGCACC GGCCACTGTA CGACGTGACG
CAGGGATCGA TGACCTACGA ACACCGCGAC GAGACGGTCC CGAAGATCGC CCGCCTGATC
GTCCGATTGA TGGCAGAACA CCCGGACGAG AAGGGGTTGA TCCACGCGCA CTCGTACGAC
ATCGCCGGTC GGCTCACCGA GTTGCTCGGC GAGTTCGGCG TCGCCGCGCG AGTCCGGCGG
CACGACCGAG CGAACCGGGA CGCGGAGCTG GCGGCGTGGA AGGCGAGCGA CGATCCGGAG
GTGTTCGTCT CGGTGAAGAT GGAGGAGGCG CTCGATCTGA AAGGCGACCT CTGTCGCTGG
CAAGTGGTGT GTAAGGCGCC GTACCGCAAC ACCAACGACT CTCGGGTCGC TCGACGACTC
GCCGACGACC AGTGGGCGTG GTACCACCGG ACCGCGCTCC GGACCGTCAT TCAGGCGTGC
GGGCGGGTCG TCCGCGCGCC CGACGACTAC GGCGCGACGT ACCTCGCGGA CGACTCACTG
TTAGACCTCT TCGACCGCGC GAAGGCCGAC ACCCCGCCCT GGTTCCGCGA CCAGATCGAC
GCGATGACGA CGCCGACGCT GCCCGACTTC GATCCCACCG CCGCGCTCGC CGGGATCGAC
GCCGAGCCGA GCGGTCCGTC ACGGGCGGCC CGTCGTGGAG GAACGGCCCT CGGTGGAGGG
TCGGCCGGGA GCGGCTTGGG CGGAAGCGGG AGCCTCAAGG GCGGCGGCTC GCATGCGGGC
GACTCGACCG CGTCCGGCGA GGCGGAGACG GCCGACGGGA CGAACGACGG GGGCGGAACG
ACGCGTACGC GCTCGGAGGC GGACGCCGAG CGCCGGGAGA ACCACCCGCT CTCCGATATC
TGGGGCGACG GCTAG
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| Protein sequence | MAVVDPDRIP AEFPAPSFRG AQEQALADIR DAFAADNDVV LVRAPTGSGK SLLARAIMGA
SATVDETAPS EATGAYYTTP QVSQIDDVEA DDLLDDLAVI RGKSNYDCIL PGEHDTPVNR
APCVRQQGFD CSVKHRCPYF SDRAIASGNR YAAMTLAYFM RTAGSEVFRK RDVVVIDEAH
GLAEWAEMYA TIELSPGRVP VWDEVGVPDV AADAGPEEDA LDRTARFAAS LRDTAKRAKD
ELTGRPELDR EEVARRDRLQ ELISELGWFL EDYRDSQSPT TWVVDQPDGE GSALAIKPLD
PARYLQHTVW DRGNKFALLS ATILSKEAFC RGVGLNPANV ALVDVEHTFP LSHRPLYDVT
QGSMTYEHRD ETVPKIARLI VRLMAEHPDE KGLIHAHSYD IAGRLTELLG EFGVAARVRR
HDRANRDAEL AAWKASDDPE VFVSVKMEEA LDLKGDLCRW QVVCKAPYRN TNDSRVARRL
ADDQWAWYHR TALRTVIQAC GRVVRAPDDY GATYLADDSL LDLFDRAKAD TPPWFRDQID
AMTTPTLPDF DPTAALAGID AEPSGPSRAA RRGGTALGGG SAGSGLGGSG SLKGGGSHAG
DSTASGEAET ADGTNDGGGT TRTRSEADAE RRENHPLSDI WGDG
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