Gene Hlac_2194 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_2194 
Symbol 
ID7401128 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp2178228 
End bp2178923 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content74% 
IMG OID643709265 
ProductEnoyl-CoA hydratase/isomerase 
Protein accessionYP_002566841 
Protein GI222480604 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.138908 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCCGCA CCCGAGACGA CGACGCGGTC CGCGTGGTGA CGATCGACCG ACCGGCGCAC 
CGGAACGCCC TCCGGCCCGA GGACCTGACC GCGCTTCGCA CGGCTGTCAC CGATACCGAC
GCGCCGGTGA CGTACCTCTG CGGTGCCGGC GAGGCGTTCT GTGCCGGCGC CGACCTCGAT
GTCGTCGCCA ACCTCGACGA TCCGGCATTG TTCGCCCGCG CGGGCCAGCG GACGGCCGCG
GCGATCGCGG ACGCGGAGAC GGTCGTGGTC TGCGGGATTG ACGGCGCGGC TCGCGGCGGC
GGCGTCGAGC TTGCGCTCGC GGCGGACCTC CGGGTGGCCA CGCCCGCCGC GACGTTCGCG
GAGCCGGGCG TCGAGTTCGG GCTGTTCGGC GCGTGGGGCG GAACCGTCCG CCTCCCGCGG
GTGATGCGCG AGGGAGACGC GCTCGACTTC GCACTGTCGG GGCGCGTGCT CGACGCCGAC
GAGGCGCTTC GGACCGGGCT CGTCTCTCGG GTCGTCGACG ACCCGCGATC GGTCGCGGAC
GCGATCGCGA GCGGCGAGCC GGACGCGCTC CACGTGATCA AACGCCGGAT ACGTGACCGG
CGCGAGGACG AGACGCAGGA GCGCGCGGAG GCGACCGCGT TCGCCGACCT CGTGCGTACA
TACGCCGACG ACATCGCGGC AGAGCGCCGG AGGTGA
 
Protein sequence
MIRTRDDDAV RVVTIDRPAH RNALRPEDLT ALRTAVTDTD APVTYLCGAG EAFCAGADLD 
VVANLDDPAL FARAGQRTAA AIADAETVVV CGIDGAARGG GVELALAADL RVATPAATFA
EPGVEFGLFG AWGGTVRLPR VMREGDALDF ALSGRVLDAD EALRTGLVSR VVDDPRSVAD
AIASGEPDAL HVIKRRIRDR REDETQERAE ATAFADLVRT YADDIAAERR R