Gene Hlac_2188 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_2188 
Symbol 
ID7401121 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp2172549 
End bp2173322 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content67% 
IMG OID643709258 
ProductGTP cyclohydrolase III 
Protein accessionYP_002566835 
Protein GI222480598 
COG category[S] Function unknown 
COG ID[COG2429] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0683488 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGACGA CTCAGGTGAC GCTGATCCAG ATCGACAACT ACGGGCCGTG GACGGTGACG 
CCGGAGCCGC GCCGGGAAAT GGATCTCCAA TCCCTCCAGT CGCGGCTCTT CGCCGACATC
GCCCAGTTCA TGGGTCCGCG GGACGCCTAC GTCTTCTCCA CCCGCTACGA CAACATGATC
GCCGTGACGA ACGGGCTCGA CGGCGCGGCC CACGCGGCGC TCCAGGAGTC GATCGGGAAC
CGCTACCCGG TGAGCGTCAG CCTCGGGACC GGGGTCTCAG AGCGTCCGAT CGACGCCCTG
GAGGCGGCGA ACCGCCTGCT CCAAACCGAA GGGAGCGCGC AAGACGAGAG CCGAACCGAG
GTGCTCGCCG GCGACTACCT CACCGAGACG GCTCCGTCGG ACCTCCAGAT TGCCCACTTC
GACGTGGTGA ACGTGACCGG GAAGTACACC GACCGCCTCA ACGAGTTCGA CACGTTCCTC
AACATCGAGC GTGCCTACGG CTCGCTGACG CGATACCTCC GAGAATCCCA CGGCGCCCTC
TCGTTTTTCG TCGGCGGCGA CAACGTCGTC GCCGTCTGTC CGGACCTCCC CGAGGGGGCG
TTCGCCGACA CGGTCGCGCA CGTGGCCGAC GACGTCGACA TCGAACTGCA GGTCGGCGTC
GGTCGCGGTG CCTCCGCCCA CGAGGCAGGA TTCGCGGCCA AACACGCGCT CGAAGCGTGC
CGAAACGACG GAACGAGCGT CGAACTGTCA GTCGCTCCGG CACTCAGCGA CTGA
 
Protein sequence
MTTTQVTLIQ IDNYGPWTVT PEPRREMDLQ SLQSRLFADI AQFMGPRDAY VFSTRYDNMI 
AVTNGLDGAA HAALQESIGN RYPVSVSLGT GVSERPIDAL EAANRLLQTE GSAQDESRTE
VLAGDYLTET APSDLQIAHF DVVNVTGKYT DRLNEFDTFL NIERAYGSLT RYLRESHGAL
SFFVGGDNVV AVCPDLPEGA FADTVAHVAD DVDIELQVGV GRGASAHEAG FAAKHALEAC
RNDGTSVELS VAPALSD