| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_2177 |
|---|
| Symbol | |
|---|
| ID | 7401110 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorubrum lacusprofundi ATCC 49239 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_012029 |
|---|
| Strand | - |
|---|
| Start bp | 2165092 |
|---|
| End bp | 2165742 |
|---|
| Gene Length | 651 bp |
|---|
| Protein Length | 216 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 643709247 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002566824 |
|---|
| Protein GI | 222480587 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1326] Uncharacterized archaeal Zn-finger protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.490755 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGAAA CAGGAGACCG AGTCGGTCTC GCCTGCCCGT CGTGTTCGCC GGGCGAGGAG
ACCGTTCACG AAGTGTTGCG TCCCGGCGGG CAGGCCACCG TCCGCTGTAC CGACTGCGAT
CACACGTACA AAACCGAGAT CCCGGAGGAG GAGACCGTCG GGCTGACCGT CATCGTCTCG
CAGGACGGCG AGTCCTTCTC GACCGAGATG GACGTGCCCG CGGACACCTA CGTCTCCACG
GGCGAGGAGT TCGTCGTCGA CTCCCCCGAC GCCCTGATGC AGGTCCGGGT GACCGGGATC
GAGGTCGGGC CCGAACAGCG CGTCGAGGAG GCCGACATCG AGGACGTCGA GACGCTGTGG
ACCCGCGCGG TCGACAACGT CACCGTCCCG GTGACGCTCC ACCCGAAGGA CGGCAACGCT
GACCAGACGC GCTCGCTGCG AGTGAACGTC CCCGGCGACT ACGAGTTCAC CGTCGGCGAG
ACCGTCGAGT TCGGCGACGA GGAGTTCGTC GTCGAGGGCG TCCAGATCCG CGAGGACGCC
CCCGAGTACC GCCACGAGAA GCTGGACCAC GACGGCGACT TCGCGTACGC CAAGGACTGC
AAGCGGGTGT ACGCCCGCGA CGAGAGTCTG ACGGCGTGGT CGGCCTGGTA G
|
|---|
| Protein sequence | MTETGDRVGL ACPSCSPGEE TVHEVLRPGG QATVRCTDCD HTYKTEIPEE ETVGLTVIVS
QDGESFSTEM DVPADTYVST GEEFVVDSPD ALMQVRVTGI EVGPEQRVEE ADIEDVETLW
TRAVDNVTVP VTLHPKDGNA DQTRSLRVNV PGDYEFTVGE TVEFGDEEFV VEGVQIREDA
PEYRHEKLDH DGDFAYAKDC KRVYARDESL TAWSAW
|
|---|
| |