Gene Hlac_2148 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_2148 
Symbol 
ID7401081 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp2136142 
End bp2136945 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content70% 
IMG OID643709218 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_002566795 
Protein GI222480558 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCACCG ACACCGGACG GGAGTTCGAC GGGGACGAAC TGCGCAGCGG CCTCGGCCTC 
GACGATCCCC GGCGGCTCCT CCGCGGACTC GCCGGCGTCG TCGGGTTCGT GGTCGTGTGG
CACCTGATAT CGCTCACGCA GGCGGCGTAC GTGTTGCCGT CGCCGGTGGC GGTCGGGGAC
GCGTTCGCCG AGGAGTTCGC CTCCGGGACG ATGACGACCG CGCTGTGGTC GAGCATCCGC
CACTGGATAC CCGGAACCGT CGTCGGCACC GGGCTCGGCG TCGCCGCCGG GGTCGCCTTC
TCGTGGAGCG GCCTCCTCGA CGACGTGACC GCCCCGCTCG TCCGGACGCT CCGACCGGTG
CCGCCGCTCG CGCTGATCGG GTTCGCTATC GCGTGGTTCG GTATCAACCA CGCCGGCGCG
GCCTTTATCA TCGCCGTCGG CGCGTTCTGG ATCAACTTCT ACGCGTCGTA CGGCGCCGTC
GAAGGGGTCT CCGAGGACTT ACTCGACGTG GGCCGGACGC TCGGCGTGCG CGGCGACCTC
GACATGGTCC GATCGATCGT CCTCCCGGCG TCGATGCCGG GGATCACGAC CGGGATCCGC
ACCGGGCTCG GACGCTGCTG GATGCTCGTC GTCGCCTCCG AGATATTCGG CGTGCCCGGC
GTCGGCCGCG AGATCCTGCG CGCGAGCAAC AACCTCCTCG TCGACAAGGT GATCGCGTAC
ATCCTCGTGT TGAGCCTGAT GTTCCTCCTC GTCGACGTGG CGTTCCGCGC GGTCCAACGG
AGGGTGTTAG TGTGGCGGGC GTGA
 
Protein sequence
MATDTGREFD GDELRSGLGL DDPRRLLRGL AGVVGFVVVW HLISLTQAAY VLPSPVAVGD 
AFAEEFASGT MTTALWSSIR HWIPGTVVGT GLGVAAGVAF SWSGLLDDVT APLVRTLRPV
PPLALIGFAI AWFGINHAGA AFIIAVGAFW INFYASYGAV EGVSEDLLDV GRTLGVRGDL
DMVRSIVLPA SMPGITTGIR TGLGRCWMLV VASEIFGVPG VGREILRASN NLLVDKVIAY
ILVLSLMFLL VDVAFRAVQR RVLVWRA