Gene Hlac_2079 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_2079 
SymbolubiA 
ID7400599 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp2066296 
End bp2067159 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content71% 
IMG OID643709150 
Productprenyltransferase 
Protein accessionYP_002566727 
Protein GI222480490 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0382] 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.728738 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.183793 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGCCACG CCGCGGTGGA CCGAGACGAC GTGCGCGAGA CAGCACGCGG AGTCTTCGAA 
CTGGCACGCC CGGGTAACTG CATCGCCGCC GCGGTGCTCA CCGGAACCGG CGCGTTCGTC
GCCGGCGCCA GCGACGCGCT CGCTCCGGCG GCGATCGCCG CGGTCACCAC CGCGTTCGCG
GTCGCCGCCG GCAACGCCAT CAACGACTAC TTCGACCGGG AGATCGACGC GATCAACCAG
CCCGACCGCC CGATCCCACG CGGCGCGGTC TCGCCGCGGC GTGCGCTCGG AATCTCCGGC
GTTTGGTTCG CGGCCGCCGT CGCGCTCGCG CTGGCGCTCC CGCGGCTGGC GCTCGCCATC
GCCGGTGTCA ACCTCGCCGC CCTCGTCACC TACACGACGA TTTTTAAGGG GACGCCGGGG
CTCGGCAACG CTCTCGTCTC GTACCTCGTG GGATCGACGT TCCTGTTCGG CGGCGCTGCC
GTCGGCCGCC CCGAGGCGGT CGTCGTGCTC GCGCTGCTCG CGGGCCTCTC GACGTTCGCC
CGCGAGGTGA TCAAAGACGT CGAGGACGTG GTCGGCGACC GGGAGGAGGG GCTTCACACT
CTCCCGGTCG CGATCGGCGA GCGCCGGTCG CTGTGGGTCG CGACCGGCTC GCTCGTCGTC
GCCGTCGCCG CCAGTCCGTT TCCGTACCTC TCCGGGACGT TCGGCGGCGC CTACCTCCTC
CTCGTCGCGG TCGCCGACGC GGTCATGCTG TACGCCTGCT ACGAGGCGTT TACCGACCCG
ACGGCGGCAC AACAGCGGTT CAAGTACGGC ACGTTCCTCG CGGCCGTCGC CTTCGTCGTC
GGTCGCGCTG CGCTGCTCAT TTAA
 
Protein sequence
MCHAAVDRDD VRETARGVFE LARPGNCIAA AVLTGTGAFV AGASDALAPA AIAAVTTAFA 
VAAGNAINDY FDREIDAINQ PDRPIPRGAV SPRRALGISG VWFAAAVALA LALPRLALAI
AGVNLAALVT YTTIFKGTPG LGNALVSYLV GSTFLFGGAA VGRPEAVVVL ALLAGLSTFA
REVIKDVEDV VGDREEGLHT LPVAIGERRS LWVATGSLVV AVAASPFPYL SGTFGGAYLL
LVAVADAVML YACYEAFTDP TAAQQRFKYG TFLAAVAFVV GRAALLI