Gene Hlac_2049 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_2049 
Symbol 
ID7402068 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp2039732 
End bp2040658 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content68% 
IMG OID643709120 
Productprotein of unknown function DUF6 transmembrane 
Protein accessionYP_002566697 
Protein GI222480460 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.172716 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCCAGGC ACCGAAATAT CGTTCTGTTC TTCACGCTCG CGCTGCTTTG GGGCGCCTCC 
TTCGTCGCCA TCGAGGTCGG GCTCGACTAC TACCCGCCCG TGCTGTACGC CGCCTATCGG
TTCGATCTGG CGGCGCTGAT TCTCGTGTCG TACGTCCTTG TGACGGAGGC CGATTCGCTC
CCGCGGACCC GCGGTGATCT GGCCGCGATC GGGTTCAGCG GCGGACTCTC TGTCGCCGCT
AACAACTCCC TGCTGTTCGT CGGTCAGCAG TACACGACGA GCGGGATCGC CTCGATCACC
TACAGCCTCG TTCCCATCGC GACCGCGGCA GTCGCGGCCG CCTGGATCGG CGGCTCCGAT
CTCGACGCGC GCGGTGGGCT CGGCGTAGTG TTGGCTTTCA TCGGCGTCGG GCTCGTCGCC
CAGCCGGACC CCGCGAACCT CGCCGGTGGC GTCACGATCG GCGTCGGACT CATCTCGATC
GGGGTAATCG CGGTCGCGGT CGGCAGCGTC GGGCTCCGCA CCGTGGAGAC GACCTTCTCC
AACGTTGCGC TCACCGGGTG GGCGATGCTG TTCGGCGCGC TGCTGATCCA CGGATTCAGC
CTCGGGCTCG GCGAGCCCCA GCGGCTCCCG TCGACCGCGC TCCCGGCGCT CGGCGCGCTG
CTGTTCCTCG GCGTGCTGGC CTCGGCGGTC GCGTACGTCA TCTACTTCAC GCTACTCGAC
CGTCTGGGCC CCTTCGAGAT CAACCTCGTC TCGTACGTCG TCCCCGTAGT AGCGACGGTG
ACGGGCGCAG TCCTGCTCGC CGAACCCGTG ACGGCGCTGA CGATCGCCGG CTTCGCCGTC
ATCGTCGTGG GGTTCGGTCT CCTCAAGCGG CACGCGATCG CCGACGAGGT ACCGCGGCTT
CTCTCCCGGA TCGGCGGGCT GTTCTAG
 
Protein sequence
MSRHRNIVLF FTLALLWGAS FVAIEVGLDY YPPVLYAAYR FDLAALILVS YVLVTEADSL 
PRTRGDLAAI GFSGGLSVAA NNSLLFVGQQ YTTSGIASIT YSLVPIATAA VAAAWIGGSD
LDARGGLGVV LAFIGVGLVA QPDPANLAGG VTIGVGLISI GVIAVAVGSV GLRTVETTFS
NVALTGWAML FGALLIHGFS LGLGEPQRLP STALPALGAL LFLGVLASAV AYVIYFTLLD
RLGPFEINLV SYVVPVVATV TGAVLLAEPV TALTIAGFAV IVVGFGLLKR HAIADEVPRL
LSRIGGLF