Gene Hlac_2023 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_2023 
Symbol 
ID7402042 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp2016393 
End bp2017022 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content69% 
IMG OID643709094 
Producthypothetical protein 
Protein accessionYP_002566671 
Protein GI222480434 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.380619 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCACAGT CTGGTTGGGA CGACACAGAT GCGGGAGCCG AAACGGGTGC GGACGGTCCT 
GCGGAACGGG AACCGAGCGG GACAGAAGAG CGGCAACCGG AGGCGACTGC AAGGGGGAGC
CCCGAGGCGG TCGGCCGACA CTGGCTTGCG GGCGCCGTAA GTGGGCTGAT CGCCGGCGTG
GCCATGGGTA TCGTGTTGCA CGGAGCGTTG GGGCTCATGC CGACGATCGG CGCCCTGATC
GGCATCGAAA CGGTCATCGC CGGCTGGGCG GTCCACCTGT TCAACAGCGC GGCGTTCGGG
ACGCTGTTCG TCGCCATCTT CGATCGCGCG TTCTTCGACG ACCTGCGCAC GGACGTCGGG
GGCTATCTCT CGCTCGGCGT CATCCACTCG GCGCTGCTCG GCATGATCAC CGGCGGACTG
CTGTTGCCGG TCGCACTCGC GATCGAGGGC GCGACCTCGC TGCCGGTGCC GACGCTCCCG
GTACCGGGGC TCACGGCGAC CCTCGAGTTC GGCGCGGTCA TCGCCGTCGC ACACCTGCTG
TACGGGCTCG TACTCGGGCG GATCTTCGCC GCGTTCACGC TCGTCGACGC CGAGATCGGA
TGGCTGCCGA TCGACCCGGT CGACCGGTAG
 
Protein sequence
MSQSGWDDTD AGAETGADGP AEREPSGTEE RQPEATARGS PEAVGRHWLA GAVSGLIAGV 
AMGIVLHGAL GLMPTIGALI GIETVIAGWA VHLFNSAAFG TLFVAIFDRA FFDDLRTDVG
GYLSLGVIHS ALLGMITGGL LLPVALAIEG ATSLPVPTLP VPGLTATLEF GAVIAVAHLL
YGLVLGRIFA AFTLVDAEIG WLPIDPVDR