Gene Hlac_2017 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_2017 
Symbol 
ID7402036 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp2010932 
End bp2011876 
Gene Length945 bp 
Protein Length314 aa 
Translation table11 
GC content65% 
IMG OID643709088 
Producthypothetical protein 
Protein accessionYP_002566665 
Protein GI222480428 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.439309 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGACCC ACATCGTGCC GGTCGGCTTC GATTACGACC GCATGATCGC CCCGCTCATC 
CGGGACCAGT TCGACGTCGA CCGGGTGATC CTCTTGGAGG GGACGGTCGG CAGCGAGGCC
AACGTCGAGT ACTCGCGCAA CATCGCGCGC AAGCTCGAAC AGGACTTTCG GAACCTGCTC
GGCGCCGAGA CCGTTCGGGA GCAACTGGAC GACGTGTACG ACTACGACGC CGCCTTCGAG
CGCGCCTTCG ATCTGATAAA TGCGGAACTC GATCGGGACG AGGGAGTCGA TGATTCCGAC
GAGCGCGAAG TGTGGGTGAA CCTCTGTTCG ATGCCGCGGC CCGTCTCCTT CGCGTTCGCG
ACCGCGGCCC ACTCGATCAT GGTCGAGCGG CAGGACGACC GCGACCGCAT CCACACCTAC
TACACCGCCC CGGAGAAGTA CTTAGAGACC GAACTCGCCG AGGAGCTCCG GGCGAACCGC
GACCTCCTGC GGGAGTTGGT CGAGGACGAC GCGGTAGCCG ACGATCGCGT CGGCGACGAC
CGCATCGCCG AACAGCTTGC CACCACCACC GACCTGCTCG CGGAGTTCGA CGAGCGCGGC
ACCACCATCG GCGCGAAGCG CATCGGGGAC AGCCACGTGA TCGAGCTTCC GGTCGCCTCC
TTCCAGAACG TCAAGCCGTT CGAGGAGCTC GTGTTGTTCA CCCTCGGCGA GCACGGCGAG
TTCGAGTCGG TCTCCGAACT GGCCGAGACG CTCGCCGCCG ACCTCAACGA GCAGTACACC
GACTCGTTCC GCTCGAAGGT GATATACAAC GTCGATCGGC TCGGCCCCGG GGGCAAGGGG
TACATCGAGC GCGAAGAACA CGGGAAGTCC TACCGAACCA CTCTCTCGCG GATCGGCGAA
CTGTGGGTCC GGGCGCACGC CGGCGAGGAT CGGGAGTTGG CGTAG
 
Protein sequence
MQTHIVPVGF DYDRMIAPLI RDQFDVDRVI LLEGTVGSEA NVEYSRNIAR KLEQDFRNLL 
GAETVREQLD DVYDYDAAFE RAFDLINAEL DRDEGVDDSD EREVWVNLCS MPRPVSFAFA
TAAHSIMVER QDDRDRIHTY YTAPEKYLET ELAEELRANR DLLRELVEDD AVADDRVGDD
RIAEQLATTT DLLAEFDERG TTIGAKRIGD SHVIELPVAS FQNVKPFEEL VLFTLGEHGE
FESVSELAET LAADLNEQYT DSFRSKVIYN VDRLGPGGKG YIEREEHGKS YRTTLSRIGE
LWVRAHAGED RELA