Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hlac_1998 |
Symbol | |
ID | 7402017 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorubrum lacusprofundi ATCC 49239 |
Kingdom | Archaea |
Replicon accession | NC_012029 |
Strand | + |
Start bp | 1992852 |
End bp | 1993181 |
Gene Length | 330 bp |
Protein Length | 109 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 643709069 |
Product | transcription termination factor Tfs |
Protein accession | YP_002566646 |
Protein GI | 222480409 |
COG category | [K] Transcription |
COG ID | [COG1594] DNA-directed RNA polymerase, subunit M/Transcription elongation factor TFIIS |
TIGRFAM ID | [TIGR01384] transcription factor S, archaeal |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.816482 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.168417 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGTTCT GTGACGACTG CGGCTCGATG ATGGTCTCTC GCGACGGGGA GATGGTGTGT CAGAACGACG ACTGCGGCGC CACCACCGAG CGCGACGAGG CGCTCGCCGC CGAGTTCGAG TCGACGACCG AGCAGACCGG CGACGAGGTG ATCGAGACGG AGGAAGGCGC GAACTTCGAG GGGAAGCCGA CCGCTAAGGA CATCGTCTGT GACAAGTGCG GCCACGGCGA GGCGTGGTAC ACGATCAAAC AGACCGGCGC CGCCGACGAG CCCCCGACGC GCTTTTTCAA GTGCAAGGAG TGCGGCCACC GCTGGCGCGG GTACAACTGA
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Protein sequence | MQFCDDCGSM MVSRDGEMVC QNDDCGATTE RDEALAAEFE STTEQTGDEV IETEEGANFE GKPTAKDIVC DKCGHGEAWY TIKQTGAADE PPTRFFKCKE CGHRWRGYN
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