Gene Hlac_1982 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_1982 
Symbol 
ID7402001 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp1978228 
End bp1978950 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content68% 
IMG OID643709053 
Producthypothetical protein 
Protein accessionYP_002566630 
Protein GI222480393 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.14566 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATATCTG AATCGCTCAA CTACCTCCGC GACGGCGACG ACGCCATCGT GACAGTGGCA 
ATCGGCGGAG TACTGCTGCT CGCGAGCCCG CTCCTGATCC CCTCGTTCCT CGTACTCGGA
TACCTCATGC GCGTCATCCG GCAGACGGCC GACGGCGACG ACGAGCCGCC GGTCTTCGAA
GCGTGGAGTG ATCTCCTCGT CGAGGGGCTG AAGGCGTTCG TCGTCACGTT CGTCTATTCG
TTGCTGCCGC TCGCGATCCT CGCGGTCGCC GCCGTGTTCG GTATCGGCGC GGTCGTCGTC
GGGTCCGGTG ACGGCACCGG CGGCGTCCTC GGCGGCCTGA TCGGCGGACT GTTGGCGCTG
CTGCTCGTCG TCGTCGCACT CGCCGTCTCG CTCGCCGGCG TCTACGTGAC TCCGGCCGCG
CTGGCCGCGG TCGCCGATTC GGGACGCGTC GGCGACGGCT TCGCGGTCGG CACGCTCTGG
GGCGTCGTCA CGAAGCGGGC GTACGCTGTC GGCTGGCTCA CTGCCGTCGC GGTGGTGTTC
GCCGGCTCGT TAGCGATCGG CGTGTTCTCT ATCGTCCCGA TTCTCGGAAC GATCGCCGGG
GTCTTCGTCC AGTTCTACGC GATCGTCGCC GCGGCAGCCA TCATCGGCTG GACGTGGACC
GACGTGCGGC CGGTCGCGAC GGACGTTGCG GAGCCCGACC CCGTGAATCG GCCCGCCGTG
TGA
 
Protein sequence
MISESLNYLR DGDDAIVTVA IGGVLLLASP LLIPSFLVLG YLMRVIRQTA DGDDEPPVFE 
AWSDLLVEGL KAFVVTFVYS LLPLAILAVA AVFGIGAVVV GSGDGTGGVL GGLIGGLLAL
LLVVVALAVS LAGVYVTPAA LAAVADSGRV GDGFAVGTLW GVVTKRAYAV GWLTAVAVVF
AGSLAIGVFS IVPILGTIAG VFVQFYAIVA AAAIIGWTWT DVRPVATDVA EPDPVNRPAV