Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hlac_1982 |
Symbol | |
ID | 7402001 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorubrum lacusprofundi ATCC 49239 |
Kingdom | Archaea |
Replicon accession | NC_012029 |
Strand | + |
Start bp | 1978228 |
End bp | 1978950 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 643709053 |
Product | hypothetical protein |
Protein accession | YP_002566630 |
Protein GI | 222480393 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.14566 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATATCTG AATCGCTCAA CTACCTCCGC GACGGCGACG ACGCCATCGT GACAGTGGCA ATCGGCGGAG TACTGCTGCT CGCGAGCCCG CTCCTGATCC CCTCGTTCCT CGTACTCGGA TACCTCATGC GCGTCATCCG GCAGACGGCC GACGGCGACG ACGAGCCGCC GGTCTTCGAA GCGTGGAGTG ATCTCCTCGT CGAGGGGCTG AAGGCGTTCG TCGTCACGTT CGTCTATTCG TTGCTGCCGC TCGCGATCCT CGCGGTCGCC GCCGTGTTCG GTATCGGCGC GGTCGTCGTC GGGTCCGGTG ACGGCACCGG CGGCGTCCTC GGCGGCCTGA TCGGCGGACT GTTGGCGCTG CTGCTCGTCG TCGTCGCACT CGCCGTCTCG CTCGCCGGCG TCTACGTGAC TCCGGCCGCG CTGGCCGCGG TCGCCGATTC GGGACGCGTC GGCGACGGCT TCGCGGTCGG CACGCTCTGG GGCGTCGTCA CGAAGCGGGC GTACGCTGTC GGCTGGCTCA CTGCCGTCGC GGTGGTGTTC GCCGGCTCGT TAGCGATCGG CGTGTTCTCT ATCGTCCCGA TTCTCGGAAC GATCGCCGGG GTCTTCGTCC AGTTCTACGC GATCGTCGCC GCGGCAGCCA TCATCGGCTG GACGTGGACC GACGTGCGGC CGGTCGCGAC GGACGTTGCG GAGCCCGACC CCGTGAATCG GCCCGCCGTG TGA
|
Protein sequence | MISESLNYLR DGDDAIVTVA IGGVLLLASP LLIPSFLVLG YLMRVIRQTA DGDDEPPVFE AWSDLLVEGL KAFVVTFVYS LLPLAILAVA AVFGIGAVVV GSGDGTGGVL GGLIGGLLAL LLVVVALAVS LAGVYVTPAA LAAVADSGRV GDGFAVGTLW GVVTKRAYAV GWLTAVAVVF AGSLAIGVFS IVPILGTIAG VFVQFYAIVA AAAIIGWTWT DVRPVATDVA EPDPVNRPAV
|
| |