Gene Hlac_1944 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_1944 
Symbol 
ID7399896 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp1944162 
End bp1944581 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content66% 
IMG OID643709015 
Producthypothetical protein 
Protein accessionYP_002566592 
Protein GI222480355 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0984994 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.589111 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACAGTG GCGGATCTAC CGACATGACG CTGGCGTTCG AGCTGAAGGC GTTGAAGGCC 
CTCGCGGACC CCAACGACGT GTTCAACAAC GCCCGGCAGT GGACGGAGTA CGTCGGCGTC
GTCAGCGAGA AGCCGACCTA CGTCGTCACG AACTTCACCC GTAAGCACCG CGTGCGCCAA
GATTTCTTCT CGGGGCCGCG CGGCGTCGAG GAGAGCTTAG AGAACATCGC CCAGCAGTTC
GACACGGATC GACACGTGTT CGTCGGCGTC GACGAGGAAG ACGAGGCGCT CGCCGAGGCA
ACCGGCTGGG AGTTCCTCCA CGTCGAGGAC GCGGCCGACG CCGCGGGGTG GATCCTCGCG
ACGGACAAGC CGGACGAGGA GGAGGCGCCC GAGAAGTCGT CGCGCGACGA CTGGCCGTAG
 
Protein sequence
MDSGGSTDMT LAFELKALKA LADPNDVFNN ARQWTEYVGV VSEKPTYVVT NFTRKHRVRQ 
DFFSGPRGVE ESLENIAQQF DTDRHVFVGV DEEDEALAEA TGWEFLHVED AADAAGWILA
TDKPDEEEAP EKSSRDDWP