Gene Hlac_1940 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_1940 
Symbol 
ID7399892 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp1940440 
End bp1941084 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content72% 
IMG OID643709011 
ProductN-(5'phosphoribosyl)anthranilate isomerase (PRAI) 
Protein accessionYP_002566588 
Protein GI222480351 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0135] Phosphoribosylanthranilate isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.812434 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCGGG TGAAGATCTG CGGGCTGACG CGGGGAGCCG ACCTCCGCGC CGCGATCGAC 
GCCGGCGCCG ACGCGGTGGG CGTCATCTCC GAGGTCCCGG TCGACTCCCC CCGCGAGGTC
GACCCGGCGA CGGCGGCGGA GCTACTCGCG GATGTACCGC CGTTCGTCAC CGCGACGCTC
GTCACGATGC CCGACTCCGC CGAGCGCGCG GTCGAGCTCC TACGGACGAT CTGTCCGGAC
GCCATCCAGC TTCACGGCGA GTGGACGCCC GACGAGATCC GGTTCATCCG CGCGGAGACG
GAGCGGAAGG TGTTACTCGC GGTCGACGCC GACGACCCGG CGCGGGCCGA GGAGTTCGAT
CGGGTCGCCG ACGCGCTCGT GATCGACTCG ACCGACGACT CCGGCGCGGG CGGCACCGGC
GAGACCCACG ACTGGGAACG AGCCGGCGAC CTCGCCGACC GACTCACCTC GCCGGTGGTC
CTCGCCGGCG GACTCACGGC CGACAACGTC GCCGAAGCGG TTCGCGCCGC CGATCCGTTC
GCGGTCGACG TGGCCTCGGG CGTCGAACTC ACCGACGGGC GAAAGGACCA CAACGCGGTG
GCCCGCTTCG TGGCGAACGC GGGGCGGGAG ATGGAGTTGG CATGA
 
Protein sequence
MARVKICGLT RGADLRAAID AGADAVGVIS EVPVDSPREV DPATAAELLA DVPPFVTATL 
VTMPDSAERA VELLRTICPD AIQLHGEWTP DEIRFIRAET ERKVLLAVDA DDPARAEEFD
RVADALVIDS TDDSGAGGTG ETHDWERAGD LADRLTSPVV LAGGLTADNV AEAVRAADPF
AVDVASGVEL TDGRKDHNAV ARFVANAGRE MELA