Gene Hlac_1933 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_1933 
Symbol 
ID7399885 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp1934451 
End bp1935032 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content65% 
IMG OID643709004 
Producthypothetical protein 
Protein accessionYP_002566581 
Protein GI222480344 
COG category[S] Function unknown 
COG ID[COG4749] Uncharacterized protein conserved in archaea 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.236478 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGACG ACGACGCCGT TGAAACGTTC TATACCGACG AACGCTGGCA GAACTGGCTC 
GACAGGCTCG AAGAGGAGGA TTTAGACCCC GAAAACGAGG ACTCCGCGCG GCTCCTGTTG
AACCTCCAAG ACGACGCCGC GATCGCGGTC GTGAAGGTGC TCGCGGCGCT CGACGACGAG
CGCATCGACG AGGACCGCGC CGTCGAGGAG ATCCGGACCG TCCGCGACAT CGTGCTCGCC
GACGTGGAGT TCGACGACGA GGACAAGGTC ATGCTGATCG ACGGCGTCCA GACCTCGCTC
GTTCCCGTCT TCTACGCGGC CGAGGAGTAC GTCGTCGGCG GCGTCGTCGA GGGCGACGTG
AGCGAGTTCG TGCACGCGGC CGCCGACGCC GAGGCCAACG ACGACCTCGA CGCCGCGCTC
GGCTACGTCG TGCAGGCCGG GACTCGAATT ATCGACGGCG AGGCTCTCGA CATCGACCTC
GTCGAGGAGC TGGAGTACGG GCTCGTCTCC GAATGGGTCA ACGGGCTCGA CTCGCTGCAG
TCGGCCATCG AGGACCCGGA AGTCGTCGAA GAAGAAGGCT GA
 
Protein sequence
MTDDDAVETF YTDERWQNWL DRLEEEDLDP ENEDSARLLL NLQDDAAIAV VKVLAALDDE 
RIDEDRAVEE IRTVRDIVLA DVEFDDEDKV MLIDGVQTSL VPVFYAAEEY VVGGVVEGDV
SEFVHAAADA EANDDLDAAL GYVVQAGTRI IDGEALDIDL VEELEYGLVS EWVNGLDSLQ
SAIEDPEVVE EEG