Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hlac_1933 |
Symbol | |
ID | 7399885 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorubrum lacusprofundi ATCC 49239 |
Kingdom | Archaea |
Replicon accession | NC_012029 |
Strand | - |
Start bp | 1934451 |
End bp | 1935032 |
Gene Length | 582 bp |
Protein Length | 193 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 643709004 |
Product | hypothetical protein |
Protein accession | YP_002566581 |
Protein GI | 222480344 |
COG category | [S] Function unknown |
COG ID | [COG4749] Uncharacterized protein conserved in archaea |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.236478 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGACG ACGACGCCGT TGAAACGTTC TATACCGACG AACGCTGGCA GAACTGGCTC GACAGGCTCG AAGAGGAGGA TTTAGACCCC GAAAACGAGG ACTCCGCGCG GCTCCTGTTG AACCTCCAAG ACGACGCCGC GATCGCGGTC GTGAAGGTGC TCGCGGCGCT CGACGACGAG CGCATCGACG AGGACCGCGC CGTCGAGGAG ATCCGGACCG TCCGCGACAT CGTGCTCGCC GACGTGGAGT TCGACGACGA GGACAAGGTC ATGCTGATCG ACGGCGTCCA GACCTCGCTC GTTCCCGTCT TCTACGCGGC CGAGGAGTAC GTCGTCGGCG GCGTCGTCGA GGGCGACGTG AGCGAGTTCG TGCACGCGGC CGCCGACGCC GAGGCCAACG ACGACCTCGA CGCCGCGCTC GGCTACGTCG TGCAGGCCGG GACTCGAATT ATCGACGGCG AGGCTCTCGA CATCGACCTC GTCGAGGAGC TGGAGTACGG GCTCGTCTCC GAATGGGTCA ACGGGCTCGA CTCGCTGCAG TCGGCCATCG AGGACCCGGA AGTCGTCGAA GAAGAAGGCT GA
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Protein sequence | MTDDDAVETF YTDERWQNWL DRLEEEDLDP ENEDSARLLL NLQDDAAIAV VKVLAALDDE RIDEDRAVEE IRTVRDIVLA DVEFDDEDKV MLIDGVQTSL VPVFYAAEEY VVGGVVEGDV SEFVHAAADA EANDDLDAAL GYVVQAGTRI IDGEALDIDL VEELEYGLVS EWVNGLDSLQ SAIEDPEVVE EEG
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