| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_1931 |
|---|
| Symbol | |
|---|
| ID | 7399883 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorubrum lacusprofundi ATCC 49239 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_012029 |
|---|
| Strand | + |
|---|
| Start bp | 1932978 |
|---|
| End bp | 1933793 |
|---|
| Gene Length | 816 bp |
|---|
| Protein Length | 271 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 643709002 |
|---|
| Product | Protein of unknown function DUF63 |
|---|
| Protein accession | YP_002566579 |
|---|
| Protein GI | 222480342 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1967] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0470483 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTCGGCG ATCTTCCCTT CCTTCCGGCG GGAACTACCC TCCCGCCCGC GCCGTACCTC
CTCGTCGTCC TGCTCGCGAC CGGCGGGGTC GTCGCCGCGC TCCGCCGGCG ACGACCGCGG
GTCACCGGTC GCCGCGTGCT CGCGCTCGCT CCGTGGATGG CGCTCGGCTC GGCGGCCCAC
GTCCTCTACG TCGTCGACGC GCTCCCGCCC CTCCTCTCAC CCTTCGCCGG CTCGCCGACC
GTCTATCTCA CGGTGGGGTC GCTGGCGGGC GCGGCGTGGC TCGTCGCCGA CGCCACCCGC
CCGGACCGGG TGCCGGCGGT CCTCGCGGTC GCCGGCACGC TCCTCCTCGC CCCGGTCGTC
GCGGTCGCGG TCTCGACCGG GCTCTCGCCG GAGGGCGCGC GCTGGTCAAC GATCGCACTC
GTGCTTACGA TCCCGATCGC CGGCGCCGTC TGGGTCGGTC TGACGCGACT TCGACCCGAA
ACTGCGATCA CCGGCGGTGT CGGCGCCCTC GCCGTGTTCG CGCACGCGCT CGACGGCGTT
TCGACCGCGG TCGGGACGAC CCACCTCGGA TTCGGCGAAC GCACGCCGGT CTCGCGGATC
CTGCTTGAGA TCGGCGGGCT CCCGTCGCTG CCGGTGGTCG GCGAGGGGTG GCTGTTCCTG
CTCGTGAAGC TCGCGGTCGC GAGCGCCGTC GTCTGGCTCT TCGCGGGGTA CATCCGGGAG
ACGCCCGGCG AGGGCTACCT CCTGCTCGGC TTCGTGGCCG CCGTCGGGCT CGGCCCCGCG
GCTCACAACC TGCTGCTGTT CGCCGTGGCG GCGTAA
|
|---|
| Protein sequence | MVGDLPFLPA GTTLPPAPYL LVVLLATGGV VAALRRRRPR VTGRRVLALA PWMALGSAAH
VLYVVDALPP LLSPFAGSPT VYLTVGSLAG AAWLVADATR PDRVPAVLAV AGTLLLAPVV
AVAVSTGLSP EGARWSTIAL VLTIPIAGAV WVGLTRLRPE TAITGGVGAL AVFAHALDGV
STAVGTTHLG FGERTPVSRI LLEIGGLPSL PVVGEGWLFL LVKLAVASAV VWLFAGYIRE
TPGEGYLLLG FVAAVGLGPA AHNLLLFAVA A
|
|---|
| |