Gene Hlac_1930 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_1930 
Symbol 
ID7399882 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp1932529 
End bp1932978 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content69% 
IMG OID643709001 
ProductUspA domain protein 
Protein accessionYP_002566578 
Protein GI222480341 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.110845 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGATC TCGACATCGA CCTCGTCCTC GTGTCCGTGG ACGGCAGCGA GGAGTCCCAC 
GAGGCGGTCG ACTACGCGAT CGCCGTCGCC GCCGAGTACG ACGCGAGCGT CCACGCCTTA
TACGTGCTCG ACGAGGACGT GGTCCGCGCG ATCGACCACG GCGTGGTCGA CGAGGGCGAC
GTGGCCGACG ACACCGAGGC GTTCACCGAC TCCGTGGTGC GGCGCGCCGA GGCGGCCGGC
ATCGCCCACA GCAACTCCAT CGCCTACGGG TTCTCCACGA AGGTGAAGAC GGTTCACCCC
GGCAGCGTCG TCCTCGACAC CGCCGAGGAG CTGGAGTCGG ACTTCATCGT CGTCCCGCGC
GAGCCCGTCT CCGGCGACCC CGGCGAGGTG CTCGGGAAGG CCGCCGAGTA CGTCCTCCTG
TACGCCAGCC AGCCCGTGCT GTCCGTGTGA
 
Protein sequence
MTDLDIDLVL VSVDGSEESH EAVDYAIAVA AEYDASVHAL YVLDEDVVRA IDHGVVDEGD 
VADDTEAFTD SVVRRAEAAG IAHSNSIAYG FSTKVKTVHP GSVVLDTAEE LESDFIVVPR
EPVSGDPGEV LGKAAEYVLL YASQPVLSV