Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hlac_1930 |
Symbol | |
ID | 7399882 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorubrum lacusprofundi ATCC 49239 |
Kingdom | Archaea |
Replicon accession | NC_012029 |
Strand | + |
Start bp | 1932529 |
End bp | 1932978 |
Gene Length | 450 bp |
Protein Length | 149 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 643709001 |
Product | UspA domain protein |
Protein accession | YP_002566578 |
Protein GI | 222480341 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.110845 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGATC TCGACATCGA CCTCGTCCTC GTGTCCGTGG ACGGCAGCGA GGAGTCCCAC GAGGCGGTCG ACTACGCGAT CGCCGTCGCC GCCGAGTACG ACGCGAGCGT CCACGCCTTA TACGTGCTCG ACGAGGACGT GGTCCGCGCG ATCGACCACG GCGTGGTCGA CGAGGGCGAC GTGGCCGACG ACACCGAGGC GTTCACCGAC TCCGTGGTGC GGCGCGCCGA GGCGGCCGGC ATCGCCCACA GCAACTCCAT CGCCTACGGG TTCTCCACGA AGGTGAAGAC GGTTCACCCC GGCAGCGTCG TCCTCGACAC CGCCGAGGAG CTGGAGTCGG ACTTCATCGT CGTCCCGCGC GAGCCCGTCT CCGGCGACCC CGGCGAGGTG CTCGGGAAGG CCGCCGAGTA CGTCCTCCTG TACGCCAGCC AGCCCGTGCT GTCCGTGTGA
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Protein sequence | MTDLDIDLVL VSVDGSEESH EAVDYAIAVA AEYDASVHAL YVLDEDVVRA IDHGVVDEGD VADDTEAFTD SVVRRAEAAG IAHSNSIAYG FSTKVKTVHP GSVVLDTAEE LESDFIVVPR EPVSGDPGEV LGKAAEYVLL YASQPVLSV
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