Gene Hlac_1846 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_1846 
Symbol 
ID7400038 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp1851499 
End bp1852740 
Gene Length1242 bp 
Protein Length413 aa 
Translation table11 
GC content71% 
IMG OID643708915 
ProductFG-GAP repeat protein 
Protein accessionYP_002566494 
Protein GI222480257 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0432083 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.157443 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCGCC GCGTTCTGTT CGCGAGTCTG ATCCTGTTGG CCGGCGGCGC GACCGGCGTC 
GGCGTCGCGC TCTTCGCGTT CGTCGGCGTC GATGACGCCA CGATCGACGC CGAGGTCGTC
TGGGAATCCG AGCCCGTCGC CGGCGACGAC GGCAGCGGTG CGGTCGTCGC CACCATGGAC
GGGGACTCGC TCGTCATCCA GTCGACGGTC GAGGACGGGA ATCGAACGAT ACGCGCCACC
GCCGTGGGCG GCGGCGTGGA GTGGAAGACG GCTGTCGGCG GGAGCGATAC TGCCGACGAC
GGCACCGATC CCCCCGCGAC GAGCGGGCTA GTCGCCGGCC AACTCGGCGG CGACGAGGTG
GTTGCGTTCA CGACCGAATC GGGATCGCTC ATCGTCCTCA ACCCGGCTGA CGGAACCGAG
CGGCTCGCCG TCGACCTCGG CGGACCGGGC GGGCTCCGGC CAGCGATCGG TGACCTCGAC
GGCGATGGCG ACGCCGAGAT CGCCGCGGTC ACGACCGACG GACGAGTCCG AGCCGTCGAC
GCCGCCGGCG AGACGGTGTT CGAGACAGAC CTCGACGCGC CGGTGAATCG TCGGCCGCTG
GCCGTCGACT TCGGCGGTGA CGCTAACGGC AGCGCGGACG ACGGAGCCGA CACCGCCCGC
GGGCTCGCGG TCGCGACCGC GGCCGACGGC GATCGCTCGA TCAGCCTGCT CGACGCGACC
GGCGAGGCCC GGTGGACGAC GACCCCGTCG GTCACGCCCC TGAGCTGGAG CGCGGCCGAC
ACGCGCAGCG GCCCGGTGCT CGCGCTCGGC GGCGCGAACG GCAACCTAGA GACGATCGAC
GTTTCCGACG GCGGAACCCG TTACGAGGTC GGGCTACAGG ATCTACCCGT CGCCGTCGGC
GACGCAGACC CCGGTCGCGT CCACGTCGGC GGGAGCGGCA GCATCTGGGC GGTCGACCTG
CTCGACGGAG AAGTCGTCTG GAAACAGCAG TACGGCGGCG ATACGCGGGT AAACGCTCCC
GGTGTCGCGG ACGTGACCGG CGACGGCTCT CCGGGCCCGG TCGTGGTGAA TCGGGATGGA
GGCGTGCTCG CACTGAACCA GAAGGGCGAG GCGATCGCCC GCGGCAATAT CGGTACCGCC
GTCGTGTACG GGGGGCCGCT GTTCGCGGAC GTGACCGGCG ACGGAAGCGC CGAGGTACTC
ATCGTCGCCG AGGACGGGCG GATCGTTGCG CTGTCCGACT GA
 
Protein sequence
MDRRVLFASL ILLAGGATGV GVALFAFVGV DDATIDAEVV WESEPVAGDD GSGAVVATMD 
GDSLVIQSTV EDGNRTIRAT AVGGGVEWKT AVGGSDTADD GTDPPATSGL VAGQLGGDEV
VAFTTESGSL IVLNPADGTE RLAVDLGGPG GLRPAIGDLD GDGDAEIAAV TTDGRVRAVD
AAGETVFETD LDAPVNRRPL AVDFGGDANG SADDGADTAR GLAVATAADG DRSISLLDAT
GEARWTTTPS VTPLSWSAAD TRSGPVLALG GANGNLETID VSDGGTRYEV GLQDLPVAVG
DADPGRVHVG GSGSIWAVDL LDGEVVWKQQ YGGDTRVNAP GVADVTGDGS PGPVVVNRDG
GVLALNQKGE AIARGNIGTA VVYGGPLFAD VTGDGSAEVL IVAEDGRIVA LSD