| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_1807 |
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| Symbol | |
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| ID | 7399681 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorubrum lacusprofundi ATCC 49239 |
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| Kingdom | Archaea |
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| Replicon accession | NC_012029 |
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| Strand | + |
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| Start bp | 1822043 |
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| End bp | 1822969 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 643708874 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_002566456 |
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| Protein GI | 222480219 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGAGCG CGACGAGACC CGCGACGGTC CGGGAACGCG TGGCCGACTC CGACCGCTCG
GTCGGCCGAC TCCTCCTCGT CACGGCCGGC GCGCTGTTCT GGGGCTGGCT CGTCGTGAGC
TGGGTCAATC GGTGGCTCGG CGGAGTCATT GTGCCGATCG GCCAACCACT CGTTCCGCCG
GGGGCCGTCG AGACGGCTCT CGGATCGATT CCGGGGATCG CCGCGTACGC GGCCGACGCC
GCCTTCGTCG TCGAGATGAC CCCCGCTCTG TCGCGCGGGA CGTGGCTCAC GGTCGTGATC
ACCGCGATGA GCCTTGTTCT CGGATTCTTC ATCGCGGTTC CGCTGGCGGT AACCCGTGTG
TACGGTCGGT TCTCGGCGTG GCTCTCGCTG GCGTACACGG AGCTGTTACG CGGCACTCCA
CTCTTGGCGC AGCTGTTCGT GCTCTACTAC GGGCTCAACC TTGCGAGCTA CGTGCCCGGT
TCAGTCTCCG GCGTGTTCGC GCGGGACGTG GTCTGGGTGG CGATCCTCGG GTTCACGCTC
AACGGGGCCG CCTATCAGGC CGAGTACATC CGAGGCGCCT TAGAGAGCGT CGAGGAGGGG
CAGATCACCG CCGGCCGTGC GATCGGGCTG TCGAAGGTGG AGACGATATA CTACGTCGTG
CTCCCGCAGG GACTCCGGTA CGCGATCCCA TCGTGGACCA ACGAGTTCGT CTACCTGATC
AAGTACTCGT CGCTTGCGGC CTTCATCACG GTCCCCGAGC TGTACTACCG GGCCGACCAG
ATCGCTTCCG AGACGTTCCG CTACACGCTC ATCTTCGTTG TGACTGGACT GACGTACCTC
GCGTTGGTTC TCACCGCCTC GAAGCTGATG GAGCGCGTCG AGGAGAGGGT GGCAATTCCG
GGGCTCGGCA CCGAGAGCCA GGAGTGA
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| Protein sequence | MASATRPATV RERVADSDRS VGRLLLVTAG ALFWGWLVVS WVNRWLGGVI VPIGQPLVPP
GAVETALGSI PGIAAYAADA AFVVEMTPAL SRGTWLTVVI TAMSLVLGFF IAVPLAVTRV
YGRFSAWLSL AYTELLRGTP LLAQLFVLYY GLNLASYVPG SVSGVFARDV VWVAILGFTL
NGAAYQAEYI RGALESVEEG QITAGRAIGL SKVETIYYVV LPQGLRYAIP SWTNEFVYLI
KYSSLAAFIT VPELYYRADQ IASETFRYTL IFVVTGLTYL ALVLTASKLM ERVEERVAIP
GLGTESQE
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