Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hlac_1805 |
Symbol | |
ID | 7399679 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorubrum lacusprofundi ATCC 49239 |
Kingdom | Archaea |
Replicon accession | NC_012029 |
Strand | + |
Start bp | 1820497 |
End bp | 1821300 |
Gene Length | 804 bp |
Protein Length | 267 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 643708872 |
Product | polar amino acid ABC transporter, inner membrane subunit |
Protein accession | YP_002566454 |
Protein GI | 222480217 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0765] ABC-type amino acid transport system, permease component |
TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGGACC CGGCGACGCT CGCGCTCGCG GCGGTCGACA GCCTCGGCGC CGCGGGAGCG CCGTCGGCCG CGCCGGGCCA GCCGCTCATC GACTTCGTCT CGCGGCTCGT CGGCGAGGCC GCGGACTGGG AGTTCGTCTT CAGCAACGCC GACTACCTCG GCGTCGGCGC CCTGTTGACG ATTGGGCTCA CGGCCGCATC GATACTCCTC GGGTTCGTCG TTGGCTTTCC GGCCGGCGCG GTCGAGGTGT ACGGCGACGG CCCCCTCAAA CGGGTCGTCA GCGCGGCCGG GATCGTGCTC CGCGGGACAC CGATCGTCGT GATCCTCATC GTGATGTACT TCGTCGTCGG CGTCCCGCAG ATCAACCTCG GTGTCGCCTC GATCTCCTCG GCGATGACGG CCGGAATCTT GGGGCTCGGC CTACGCAGCG CCGCGTACCA GTCGCAGATC TTCCGGGCGA CCTTATCGAG CGTCGACGAC GGCCAGCTTG AGGCCGGGCG CTCGATCGGG CTCTCGCGAT TCGAGGCGGT TCGATACGTC GTCGTTCCGC AGGCTCTGCG CCGGTCGATC CCGGGCTTTC AAAACGAGTT TACGATCGTG TTGAAAGATA CGAGCATCGT ATTCGCAATC GGGCTCGCGG AGCTGCTGAC TCGGGGATAC GACCTGTTCT CGGAGCAGAC GACCGCAGTG CTCGAAGTCA TCTTGTTCAT CAGTGCAATC TACTTCGTCC TCACGTTCAC GACGAACCGC GCGCTTGACC GCCTCGGCGA CTACTACGCA ATTCCGGAGG GGGAGTCGGC GTGA
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Protein sequence | MSDPATLALA AVDSLGAAGA PSAAPGQPLI DFVSRLVGEA ADWEFVFSNA DYLGVGALLT IGLTAASILL GFVVGFPAGA VEVYGDGPLK RVVSAAGIVL RGTPIVVILI VMYFVVGVPQ INLGVASISS AMTAGILGLG LRSAAYQSQI FRATLSSVDD GQLEAGRSIG LSRFEAVRYV VVPQALRRSI PGFQNEFTIV LKDTSIVFAI GLAELLTRGY DLFSEQTTAV LEVILFISAI YFVLTFTTNR ALDRLGDYYA IPEGESA
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