Gene Hlac_1765 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_1765 
Symbol 
ID7399637 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp1782439 
End bp1783605 
Gene Length1167 bp 
Protein Length388 aa 
Translation table11 
GC content68% 
IMG OID643708830 
Productaminotransferase class V 
Protein accessionYP_002566414 
Protein GI222480177 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0075] Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.333913 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0106496 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGACG CATCTGCGCT GACCAAGCAA GAGGACGACG CACCAGACGT AGGGGAGCTG 
ACGCCACCGG ACCGGACGCT GATGGGACCG GGGCCGAGCG ACGTCCATCC CCGCGTGCTC
AAGGGAATGA GCACGCCGCT CGTCGGCCAC CTCGACCCCT CGTTCGTCGA GATCATGGAC
GAGGTTCAGG AGCTGCTGCG CTACACGTTC CGGACGGACA ACCAGTGGAC GATTCCGGTC
TCGGGAACGG GATCGGCGTC GATGGAAGCG GCCATCGGCA ACCTCGTCGA GCCGGGCGAC
ACGATGTTAG TCCCGACGAA CGGCTACTTC GGCGGGCGGA TGAAGTCGAT GGCCGAGCGC
GCGGGCGGCG AGGTTGTCGA GGTATCGGCG CCGTGGGGCG AACCCCTCGA CCCGGTCGAT
GTTGAGCGCG CGTTCGACGA ACACCAGCCG GACGTGTTCG GGTTCGTTCA CGCGGAGACC
TCGACCGGGG TCCTCCAGCC GAACGTCCCC GAACTGACCG ACATCGCGCA CGACCACGAC
GCGCTCGTGA TCGCCGACTC CGTCACCTCG CTGGGCGGCG TCGAGCTGCG CGTCGACGAG
TGGGACATCG ACGTGGCCTA CTCCGGCCCG CAGAAGTGCC TCTCGTGTCC GCCCGGTGCG
AGCCCGCTCA CGCTCAACGA CCGCGCGATG GACAAGGTGC TCGGCCGCGA GGAGCGGCCC
CGCTCGTGGT ACCTCGACCT CTCGCTTTTG GAGGGGTACT GGGGCGACGA CCGCTCGTAC
CATCACACTG CGCCGATCTC CAACGTGTAC GCGCTTCGCG AGGCGCTCCG CCTCGTCGCC
GAGGAGGGGA TCGAAGCGCG CTGGGCGCGC CATCGCGCCG TCGCCGGCGA TCTGAAGGCG
GGTCTTCAGG ATCTGGGCCT CGAGATGAAC GCCCCCGACG AGTACTGGCT CCCGAGCCTG
AACGCGGTGC GAGTCCCTGA CGGGATCGAC GACGGCGCCG TCATCGACCA CCTCCTCGAG
GAGTACGATC TGGAGATCGC GTCCGGACTG GGCGATCTGG AGGGCGATAT CTGGCGGATC
GGCTGTATGG GCTACTCGGC CCGCCCGAAA AACGTCGAGT ACGTCCTCGC GGCGCTGGAG
GACGCGCTGG GCCAGCAGGG GTTCTAA
 
Protein sequence
MSDASALTKQ EDDAPDVGEL TPPDRTLMGP GPSDVHPRVL KGMSTPLVGH LDPSFVEIMD 
EVQELLRYTF RTDNQWTIPV SGTGSASMEA AIGNLVEPGD TMLVPTNGYF GGRMKSMAER
AGGEVVEVSA PWGEPLDPVD VERAFDEHQP DVFGFVHAET STGVLQPNVP ELTDIAHDHD
ALVIADSVTS LGGVELRVDE WDIDVAYSGP QKCLSCPPGA SPLTLNDRAM DKVLGREERP
RSWYLDLSLL EGYWGDDRSY HHTAPISNVY ALREALRLVA EEGIEARWAR HRAVAGDLKA
GLQDLGLEMN APDEYWLPSL NAVRVPDGID DGAVIDHLLE EYDLEIASGL GDLEGDIWRI
GCMGYSARPK NVEYVLAALE DALGQQGF