Gene Hlac_1741 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_1741 
Symbol 
ID7400499 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp1755201 
End bp1755794 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content68% 
IMG OID643708808 
ProductFAD-dependent pyridine nucleotide-disulphide oxidoreductase 
Protein accessionYP_002566393 
Protein GI222480156 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0492] Thioredoxin reductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.417007 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.368998 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGCTCA TGGTGAACGT AGCAATCGTC GGCGGCGGAC CGGCCGGGCT CAGCGCGGGA 
CTGTTCACGG GCAAAAATGG GCTCGACACG GTCTTGTTCG ACACGGACGG GACGTGGATG
CACAAGGCAC ACCTGTTCAA CTACCCCGGA ATCGGCTCGG TCGGCGGCAG TGAGTTCCTC
GCGACCGCTC GTCAGCAGGC TGACGACTTC GGGGTCGACC GCTATCAGGG CGAGGAGGTC
ACCGCGGTCG AGGCGGCCGG CGACGGCTTC GTCGTGACCA CCGAGGCGGA CGAGTACGAG
GCCGATTACG TCGTGCTGGC GACAGGCGCG AGCCGCGACC TCGCCGAGTC GCTCGGCTGT
GAGTTCGACG GCGACCTCGT CGACGTCGGC GTCTCGATGG AAACGAGCGT CGAGGGCGCG
TACGCGACGG GCGCGATGGT CCGCGCCGAG GAGTGGCAGG CGGTCATCTC GGCCGGCGAC
GGCGCCGCCG CGGCCCTCCA CATCCTCTCG AACGAGAAGG GCGAGCACTA CCACGACTTC
GACGTGCCCG ACACCGCGAC CTCGGTGTTC GGCGGCCTGA TCGACGACGA GTAA
 
Protein sequence
MLLMVNVAIV GGGPAGLSAG LFTGKNGLDT VLFDTDGTWM HKAHLFNYPG IGSVGGSEFL 
ATARQQADDF GVDRYQGEEV TAVEAAGDGF VVTTEADEYE ADYVVLATGA SRDLAESLGC
EFDGDLVDVG VSMETSVEGA YATGAMVRAE EWQAVISAGD GAAAALHILS NEKGEHYHDF
DVPDTATSVF GGLIDDE