Gene Hlac_1724 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_1724 
Symbol 
ID7400481 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp1742311 
End bp1743174 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content73% 
IMG OID643708791 
Productcopper ABC transporter permease 
Protein accessionYP_002566377 
Protein GI222480140 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.048412 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGGCC CCCTCACCGG CGTCGCGACC GTGTTCCGAC GCGAACTCGC GACGGTGGTC 
CGAACTCCGG GCTACGGCGT GCTGGCGGTC GGACTGCTCG TCGCCGTCGG CGGCCTCCTC
GCGGCGGGCG GCGGGGGCGC CACCGGGTTC GTGCCGGCGG TCGTCGACCT GCTCCTCCCG
ACCGAGGCAC TCGTCCCGCT CGTCGGGGTG GTGTTGGGGT ACCGCGCGCT GCTCTCCGAC
GGCGCGAGCG GGGAACTCGC GGTGATCCGG ACGTACCCGG TTCGGGTCAG CGAGTACGTC
GCCGGGGTGT TACTGGCGCG GACGGTTGCG CTCGTCGCCG TGGTGGGCGT TCCGTACGCG
GTAGTCGGTG CCGGGGTCTG GCTGACCGTC GCGCCGGACA CGGGGATCTT CGCGACTCAC
GCCGGGATCG ACTCGCCGGT GTTGTACCTC CGGTTCCTCG CGTTCGTCCT CCTGTTGGGC
GCGGCGTACG TGTCGCTCGC GGCCGCCGTC TCGGCGCTCG CCGCGAGTCG TCGGAGCGCG
ATCGCGCTCG GGGTCCTCGC GCTGGTCGCG GGCGTGCTCG GCGGTGACCT CCTTCTGCTC
CGCTCGCTCG GCGGTGGGGC ATCGCCAGCG ACGATCTCCG GATCGCTCGC GCTGGCGCCG
AACGGGGCGT TTCGCGGGCT CGTCTTCGAA CACGTGATCG GCGTCGCCTT CGCGCCGGAG
GGTGGGTTCG TCTCGACGAA CCGCGCGGTC GGATCGCTGG TCGGCTGGGC GCTTCTCGGC
GCTGGCCTCG CGGGCGCGGC GCTGGCGTAC GGCCGCCGCG TCGACGCGCT TCTCGAACGC
GTCCGGAGCA GAATCGCCGG CTGA
 
Protein sequence
MSGPLTGVAT VFRRELATVV RTPGYGVLAV GLLVAVGGLL AAGGGGATGF VPAVVDLLLP 
TEALVPLVGV VLGYRALLSD GASGELAVIR TYPVRVSEYV AGVLLARTVA LVAVVGVPYA
VVGAGVWLTV APDTGIFATH AGIDSPVLYL RFLAFVLLLG AAYVSLAAAV SALAASRRSA
IALGVLALVA GVLGGDLLLL RSLGGGASPA TISGSLALAP NGAFRGLVFE HVIGVAFAPE
GGFVSTNRAV GSLVGWALLG AGLAGAALAY GRRVDALLER VRSRIAG