Gene Hlac_1635 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_1635 
Symbol 
ID7399584 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp1656307 
End bp1656963 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content65% 
IMG OID643708701 
Productprotein of unknown function DUF124 
Protein accessionYP_002566290 
Protein GI222480053 
COG category[S] Function unknown 
COG ID[COG2013] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.175019 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCTCG ATCAGTTCAC CGCCGAGAAC GCACCGACAG CGAGCGACGA GACGTTTCAA 
CGCGAGAACA GCTACACCTT GGACGTCGAC GTCGACGGCA CCGTGATGGC GAAGGCCGGA
TCGATGGTCG CGTACACGGG CGACATTTCG TTCACCGGAA AGGCCTCGGC AGAGGGAGGA
ATTACGGGCT TCCTCAAGGA GGCCGCCACC GGCGAGGGAA CGCCGATTAT GAGCGTCGAG
GGCGAGGGTC ACGTCTACTT CGCAGACGAC GGCAAGAAGG TACAGGTCGT CGAGCTCGGC
GCTGGCGAGT CGATCACGGT CAACGGCGAG GACGTGCTCG CGTTCGAGGA GTCGCTCTCC
TACGAGATCA GCACCATCGA CAGCCTCGCT GGGGCGTTCG CGGGCGGCTT CAGCAACGTC
TACCTCGAAG GGCCGGGCTA CGTGGCGCTC ACTACCCACG GCGATCCGAT CGTCTTGGAG
CCGCCGGTCG CGACCGACCC GAGCGCGACC GTCGCGTGGG GCGGTACCTC CCCGAACGTG
GAAGTCAATC GGAGCCTCTC GGACATGATC GGTCAGGAGT CGGGCGAGCG CTACCAGATG
CGCTTCGAGG GTCCCGACGG CTTCGTCGTG GTCCAGCCGC GCGAAGAGCA CGTCTAA
 
Protein sequence
MNLDQFTAEN APTASDETFQ RENSYTLDVD VDGTVMAKAG SMVAYTGDIS FTGKASAEGG 
ITGFLKEAAT GEGTPIMSVE GEGHVYFADD GKKVQVVELG AGESITVNGE DVLAFEESLS
YEISTIDSLA GAFAGGFSNV YLEGPGYVAL TTHGDPIVLE PPVATDPSAT VAWGGTSPNV
EVNRSLSDMI GQESGERYQM RFEGPDGFVV VQPREEHV