Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hlac_1614 |
Symbol | |
ID | 7399563 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorubrum lacusprofundi ATCC 49239 |
Kingdom | Archaea |
Replicon accession | NC_012029 |
Strand | - |
Start bp | 1633831 |
End bp | 1634598 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 643708680 |
Product | TM helix repeat-containing protein |
Protein accession | YP_002566269 |
Protein GI | 222480032 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.232731 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.487938 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGATATCA TGGGATTCAC AGACCCACTC ATGCTTCAGA TCGACGTTCC AGGCGAACCG AGGTATCTAC AAGAGAGCAT AGCGGATATC ATCGCCTTCC TGCCCCGACT CATCGGCGCA GTAGTCATCC TGCTCGTCGG ATGGATCATC GGTCGCCTCG TCGCGGGAGC CGTCCGACGC ATTGTTGACC GGACCGAAGT GGATCGGCTC GTGATGAACA CGCCGCTTGG CGGGGCTCTC GGTGGGAGCG AAAGGGCGAT ATCACGGAGT CTCGGTCGCG CCGCGGGGTA CTTCGTGTAC GCGCTGGCGA TACTCACGGC GGCGGACGCG CTCGACGTCG AACTCCTGTC GGAGTGGATC GCAGCCGCCG TGTCGTACCT TCCGGCGTTC ATCGCCGGCG TGCTCATCAT CGTTATCGGC TTCGTTCTCG CGGACTTCGT TGCCGATATC GCCGCACACA CGGAGACGGT CACGGAGACT AGCTACACCG ACGTGTTCGC CGATGGGTTG CGCGTCTTCC TCTACTTCGT TGTAACCGTC ATCGGACTGG GTACGATGGG TGTCGATGTT CAGATCCTCA ATACGTTTGC ACAGGCCGCG GCGTGGGGGC TGGCCGCCGG TATTGCTCTC GCCATCGGTA TCGCATTCGG TCTCGGCGGC CGAGACTACG TCGCCACCAA TATCGGTGAC TGGCTCCCCG GAAGAGCGCC TGATCCGGAA TCGACCCCGA TGGGCCAGCC CGACGGCGGC GAGGAATCGA CCGACTGA
|
Protein sequence | MDIMGFTDPL MLQIDVPGEP RYLQESIADI IAFLPRLIGA VVILLVGWII GRLVAGAVRR IVDRTEVDRL VMNTPLGGAL GGSERAISRS LGRAAGYFVY ALAILTAADA LDVELLSEWI AAAVSYLPAF IAGVLIIVIG FVLADFVADI AAHTETVTET SYTDVFADGL RVFLYFVVTV IGLGTMGVDV QILNTFAQAA AWGLAAGIAL AIGIAFGLGG RDYVATNIGD WLPGRAPDPE STPMGQPDGG EESTD
|
| |