Gene Hlac_1614 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_1614 
Symbol 
ID7399563 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp1633831 
End bp1634598 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content62% 
IMG OID643708680 
ProductTM helix repeat-containing protein 
Protein accessionYP_002566269 
Protein GI222480032 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.232731 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.487938 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATATCA TGGGATTCAC AGACCCACTC ATGCTTCAGA TCGACGTTCC AGGCGAACCG 
AGGTATCTAC AAGAGAGCAT AGCGGATATC ATCGCCTTCC TGCCCCGACT CATCGGCGCA
GTAGTCATCC TGCTCGTCGG ATGGATCATC GGTCGCCTCG TCGCGGGAGC CGTCCGACGC
ATTGTTGACC GGACCGAAGT GGATCGGCTC GTGATGAACA CGCCGCTTGG CGGGGCTCTC
GGTGGGAGCG AAAGGGCGAT ATCACGGAGT CTCGGTCGCG CCGCGGGGTA CTTCGTGTAC
GCGCTGGCGA TACTCACGGC GGCGGACGCG CTCGACGTCG AACTCCTGTC GGAGTGGATC
GCAGCCGCCG TGTCGTACCT TCCGGCGTTC ATCGCCGGCG TGCTCATCAT CGTTATCGGC
TTCGTTCTCG CGGACTTCGT TGCCGATATC GCCGCACACA CGGAGACGGT CACGGAGACT
AGCTACACCG ACGTGTTCGC CGATGGGTTG CGCGTCTTCC TCTACTTCGT TGTAACCGTC
ATCGGACTGG GTACGATGGG TGTCGATGTT CAGATCCTCA ATACGTTTGC ACAGGCCGCG
GCGTGGGGGC TGGCCGCCGG TATTGCTCTC GCCATCGGTA TCGCATTCGG TCTCGGCGGC
CGAGACTACG TCGCCACCAA TATCGGTGAC TGGCTCCCCG GAAGAGCGCC TGATCCGGAA
TCGACCCCGA TGGGCCAGCC CGACGGCGGC GAGGAATCGA CCGACTGA
 
Protein sequence
MDIMGFTDPL MLQIDVPGEP RYLQESIADI IAFLPRLIGA VVILLVGWII GRLVAGAVRR 
IVDRTEVDRL VMNTPLGGAL GGSERAISRS LGRAAGYFVY ALAILTAADA LDVELLSEWI
AAAVSYLPAF IAGVLIIVIG FVLADFVADI AAHTETVTET SYTDVFADGL RVFLYFVVTV
IGLGTMGVDV QILNTFAQAA AWGLAAGIAL AIGIAFGLGG RDYVATNIGD WLPGRAPDPE
STPMGQPDGG EESTD