Gene Hlac_1564 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_1564 
Symbol 
ID7401497 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp1583856 
End bp1584506 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content71% 
IMG OID643708631 
ProductMethyltransferase type 11 
Protein accessionYP_002566221 
Protein GI222479984 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGACT GGGACGACCG CTTCGTGTCC GGGGAGTACC CGCGTGCGCC GGAGCCATCC 
GCCGTCCTGC GCTCGTACGA GCCCGCGATC CCCGACGGCC GCGCGCTCGA CGTGGCCGCC
GGTACCGGCC GCAACGCCGT CTACCTCGCG GAGGCTGGCT ACGCGGTTGA CGCCCTCGAC
GCCTCCCGCG AGGGGCTCGC CATCGTCCGC GAACGCGCCG CCGAGCGCGA TGTCGCTGAT
CGGGTCGAAA CGATTCAGGC CGACGCCTCG ACGTACGGCT TCCCGGATGA GACGTACGAG
CTGATCACGA TGAGCTTTTT CCACACGCTC GACCGGTTCG CCGACCTGAT CGAGTCGCTC
ACTCCCGGTG GGTACCTGTT TGTCGAAGGA CACCTGCGGT CGGCCGACGC GACTCCGTCC
GGTCCGAGCG ACGACCGCTA CCGGTTCGCC GCCAACGAAC TCCTGCGCGC CGGGCTCGGG
CTGACCGTGC TGTACTATGA CGAGACGACG GAGGAGCGCC CGGGCGACCA CCGACGCGCG
ACCGCCCGCC TGCTCGCGCG ACGGTCGAGC GGCGGGCGAC AGACGTACCC ACCGAGACCG
GACGAGGGTG ACGAGAGAGA CGAGGCGGGC GCGGAGCGAA CGGATGGCTG A
 
Protein sequence
MTDWDDRFVS GEYPRAPEPS AVLRSYEPAI PDGRALDVAA GTGRNAVYLA EAGYAVDALD 
ASREGLAIVR ERAAERDVAD RVETIQADAS TYGFPDETYE LITMSFFHTL DRFADLIESL
TPGGYLFVEG HLRSADATPS GPSDDRYRFA ANELLRAGLG LTVLYYDETT EERPGDHRRA
TARLLARRSS GGRQTYPPRP DEGDERDEAG AERTDG