Gene Hlac_1561 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_1561 
Symbol 
ID7401494 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp1581927 
End bp1582856 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content64% 
IMG OID643708628 
Productaldo/keto reductase 
Protein accessionYP_002566218 
Protein GI222479981 
COG category[R] General function prediction only 
COG ID[COG0656] Aldo/keto reductases, related to diketogulonate reductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCGCTCT GGGACGGTGA CCGCGACGAG CGCGACGGAA AACGGGTGTC GGAAGCGGTA 
GTTTCAATCA GTGAACCGTT GAACCCACCT CGTGTGACCA TTCCAACACA GACGCTCCCG
AGCGGTGACA CCCTACCGGC GCTCGGACTG GGCACGTACG CGCTCGACGA CGACCAAATC
GCCGACAGCG TCCGTGCGGC GCTTTCGTCC GGGTACACAC ACATCGATAC TGCCGAGGGA
TACCACAACG AGGAGGCCAT CGGCGAGGTG CTCGCCGAGT ACGACCGCGA CGACGTGTTC
CTCACCTCGA AAGTGCTCGC GAAGAACCTC GGCTACGAGT CGCTGATCCA GTCTTGTGAA
GCGTCCCTCG AACGGCTCGA GACCGACTAT CTCGATCTGT ACCTCATCCA CTGGCCCAAC
CCCGCGATCT CGCTGCGAGA GTCGCTCCAG GCGATGGCGG AACTCCACGA CCGCGGACTG
GTTCGCAACG TTGGCGTCTC GAACTTCAGC GCCTATCAAC TGAGCTGTGC CAATCACATC
TCCGAGGTCC CGATCGCAGT CAATCAGATC GAGTTCCATC CGTGGTTCCA GCGCCCGAAC
CTCGTCGACT ACTGTCACGA GTCCGACACC GTGATCGAGG CGGCGGCGCC GCTCGCGCGA
ACAGAAGTGT TCGACGACGA GGTCGTTGCC GAACTCGCCG AGAGCTACGA CAAAAGCCCC
GCTCAGGTCA TTCTCCGATG GGCGCTCGAC CGCGACGTGG TCGCGCTGCC GCGCTCGTCG
ACGCCGGAAC ACGTTCGAGC CAACGCCGAC CTCGACTGGG AGCTCGACGC AGCCGACCGC
CAGCGGCTCG ATGAGCGCGA CCGCGACCGG CCGGTGTACG ACACTCCGGC CCGTGACTGG
ACGGATCCGG TGTACGGCAT CGAGCAGTGA
 
Protein sequence
MPLWDGDRDE RDGKRVSEAV VSISEPLNPP RVTIPTQTLP SGDTLPALGL GTYALDDDQI 
ADSVRAALSS GYTHIDTAEG YHNEEAIGEV LAEYDRDDVF LTSKVLAKNL GYESLIQSCE
ASLERLETDY LDLYLIHWPN PAISLRESLQ AMAELHDRGL VRNVGVSNFS AYQLSCANHI
SEVPIAVNQI EFHPWFQRPN LVDYCHESDT VIEAAAPLAR TEVFDDEVVA ELAESYDKSP
AQVILRWALD RDVVALPRSS TPEHVRANAD LDWELDAADR QRLDERDRDR PVYDTPARDW
TDPVYGIEQ