Gene Hlac_1463 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_1463 
Symbol 
ID7400290 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp1469681 
End bp1470472 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content71% 
IMG OID643708524 
Productanaerobic dehydrogenase cluster protein 
Protein accessionYP_002566121 
Protein GI222479884 
COG category 
COG ID 
TIGRFAM ID[TIGR03172] probable selenium-dependent hydroxylase accessory protein YqeC 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTTCGG ACATGAACGA TGTCGTCGAC GCGCTCGACG CGGCCGCGGG AACGACCTGT 
CTCGTCGGCG CCGGCGGGAA GAAGACCACT CTCTACGCGC TCGCCGACCG TCTTGACCGG
GCGGTACTCA CTGCGACGGT TCGGATCCCG ATCTTCGACC GCGAGGTCGC CGCGGTGCGC
GTCACCGAGG CTCCCGTCGC CGCGCTCGAC GAGATCACGG CGGGCGAGGG AGACGAACCA
ACGGGAGACG CCGAGTCGAG GGGAGGCGCC GAGTCGTTCC CGCTCGGACT GGTCCCGGAG
CGCGAGCGCG ACGACCGGTA TCGGGGGTAC GACCCAGCTG TTGTCAACGA GATCGGGGCC
GCGCACGACG GGCCGGTCCT CGTGAAGGCC GACGGCGCAC GGACGCGCCT GCTCAAGGCT
CCCAACGAGC GCGAGCCGCA GATCCCGGCG AGCGCGGACC GCGTGGTTCC GGTGGCGAGC
GCCGGCGCGG TCGGAGAGCC GCTGACGGCG GAGACCGTCC ACCGCCCCGA GCGCGTCGCG
GCGATTACGG ATGCGGCGGT CGGCGACGAG ATCACGCCCG AACTGGTCGG TCGCGTCCTC
GCGCACGAGG AGGGTGGTTT AAAAGGGATT CCGGGCGGCG CGACCGCAAT CCCGCTCGTC
AATGCGGTCG ACGACGCCGA CGACGAGGCG GCGGCGCGAG AGATCGCTCG GGTCGTTCAC
GAGCGCGCGG ACGTGCCGCG GGTCGTCCTC GCGCGGATGA TCGAGGGGGA GATTGTGGAC
GTCATCGAGT AA
 
Protein sequence
MRSDMNDVVD ALDAAAGTTC LVGAGGKKTT LYALADRLDR AVLTATVRIP IFDREVAAVR 
VTEAPVAALD EITAGEGDEP TGDAESRGGA ESFPLGLVPE RERDDRYRGY DPAVVNEIGA
AHDGPVLVKA DGARTRLLKA PNEREPQIPA SADRVVPVAS AGAVGEPLTA ETVHRPERVA
AITDAAVGDE ITPELVGRVL AHEEGGLKGI PGGATAIPLV NAVDDADDEA AAREIARVVH
ERADVPRVVL ARMIEGEIVD VIE