Gene Hlac_1421 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_1421 
Symbol 
ID7400740 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp1433362 
End bp1433751 
Gene Length390 bp 
Protein Length129 aa 
Translation table11 
GC content66% 
IMG OID643708482 
Producttranscriptional regulator, HxlR family 
Protein accessionYP_002566079 
Protein GI222479842 
COG category[K] Transcription 
COG ID[COG1733] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCATCGC AGGATCTCGC CGGCTCAGAA CCGGCGAAAA CGGCCGAATC AGAGCCCGAA 
ACGGACACGT CTTCGACCCC GGAGACGCCG TGTCCGGTGG TCGACTCGCT CGAACAGATC
GGCTCGCGCT GGCGGCTCGT CGTCCTCCAC GAGCTGTTGA ACGGCGAGTC CCGATTCAAC
GAGCTGAAAC GCGAGACCGA CGCGAACGCC CGGACGCTCT CGCGCGTGCT CGACGACCTC
CAAGAGACCG ACTTCGTCGA CCGCCGACTG GAGGAAGACT CGCCCGTCGC GACGTACTAC
AGCCTCACGC CGAAGGGCGA GTCGCTCGCG CCCGTCTTCG AGGAGATCGA CGAGTGGGCC
CACGAGTGGC TCGCCGAGTG CAGCGGGTAG
 
Protein sequence
MSSQDLAGSE PAKTAESEPE TDTSSTPETP CPVVDSLEQI GSRWRLVVLH ELLNGESRFN 
ELKRETDANA RTLSRVLDDL QETDFVDRRL EEDSPVATYY SLTPKGESLA PVFEEIDEWA
HEWLAECSG