Gene Hlac_1406 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_1406 
Symbol 
ID7400725 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp1415842 
End bp1417956 
Gene Length2115 bp 
Protein Length704 aa 
Translation table11 
GC content71% 
IMG OID643708467 
Productmolybdopterin oxidoreductase 
Protein accessionYP_002566064 
Protein GI222479827 
COG category[R] General function prediction only 
COG ID[COG3383] Uncharacterized anaerobic dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAGT GGACGCCGAC GACGTGTATG CGGTGTGCCG TCGGGTGCGG TCACCTCCAG 
CAGGGGTACA CCAACAACTA CGGACTCGAC ACCGTCCGAG GCGACGCGTC CCATCCGGTC
AACCGCGGCC TCGCCTGCCA GCGCGGGGTC AGCGAGACCG CGGACCCCGA CGGGGACTGG
CTGACGCGGC CCCTCGTCAG GGAGGACGGC ACCCTCGTCC CCACGAGCTG GGAGACGGCG
ATCGGGACGG TCGTCTCGCA TATCGAGGAC GCGCTGGCCG AAACGAGGGA CGGCGTCGCG
GTGCTGGGAA GCGGCCAGCA GACGAACGAG GCGGCGTACG CGCTGGGGAA GCTCGCGCGG
GGCGGCTTCG GCACCCGGTA CTACGACGCC AACACCACCC TCTGTATGGC CTCGGCCGTC
ACCGCCTACT ACCAGGCGTT CGGGAGCGAC GCGCCGCCGC CGACCTACGA GGACATCCCC
GACGCCGAGA CCCACGTGAT CTGGGGCGCG AATCCCGCGG TGGCGCACCC CGTGATGTAC
CGGTGGATCG CCGACAGCGC GAGCGACGAC GACAGCGAAC TGATCGTCGT CGACCCCGTC
GAGAGCGAGA CCGTCGACGA CGCCGACCTG CACGCGCAGG TCGACCCCGG CACCGATCTG
GCGTTCGCCC GGGCGGTGTT AGCGCAGACC GTCGCCGACG ACGCCGTCGA CCGCGAGTTC
GTCGCGGAGG CGACGACCGG CTTCGAGGCG ACGGTCGACT CGTTGCCCTC GGTACGGGAG
GCGGCGGAGA CCGCCGGCGT CTCGGTCGAG ACGGTCGAGC GCGTCGCCGA GGCCATGACG
GACTCGGCGC TCGTGTACTG GGGGATGGGC GTCAACCAGA GCGTGCAGGG GACCGCGACC
TCGCGGGCGC TCATCGACCT GTGTCTCGCG ACCGGGAACC TCCGGCCGGG AAGCGGACCG
TTCTCGCTGA CCGGGCAGGC GAACTCGATG GGGACCCGCG TCTGCTCGTC GAAGGGGACG
TGGCCCGGTC AACGCGGGTT CACCGATCCG GAGGAGCGGC AGTTCATCGC GGACGAGTGG
GAGATTCCAC GAAGCCGACT TCCGGACGAT CCGGGTCCGG GACCCGTCGG GATCGTCGAC
GCCGTCGCGG ACGGGCCGCC CGAGGTGTGC TGGACGGTGG CGACGAACCC GGTCGCGGGG
ATGCCCGACG CGAGCGAGGT CAGAAGCGCG CTCGACGACG CCTTCCTCGT CGCGCAGGAC
GCCTTCCGGA CCGAGACCGT CGAGCTGGCG GACGTGGTGT TGCCGGCGGC GACGTGGGGC
GAGTCCGAGG GGACCGTCAC CAACATGGAG CGCCGGATAT CGCGGGTCCG CGCCGCCACG
GAGACCTCCC CGAAGATCAA ACAGGACCTC GACATCATCG TCGCGATCGG CGCCGCGATC
GACGGGGAGC TGTTCCCCCG ACCCGCGCTC TCGCCGGAGT CGGTGTTCGA CGAGCTGCGC
GCGCTGACCG CGGGGACGCC AGCGGATCTG TCGGGGATCT CGTACGACCG GCTGGAGGCG
GAGCGCGCGG TCCGGTGGCC GGCTCCGTCA CCGGAAGCGG AGGGCGGCTA CCGCTACGTC
GACAACGACG GCTGGTCGTT CCCCACGCCG TCGGGTCGCG CTCGGTTCTC GACGGGGGCC
CATGACGGCC TCGCCGAGCC GACCGACGAC GAGTTCCCGC TGACCTTGAC GACCGGCCGG
CAGGCCGACG CGTACAACAC CGGCGTCCGC AGTCGCGGCA CCGGGACCGA CGACCCCCCG
ATGGCGCGGA TCCACCCGGA GACGACGCTG GAGTACATCG AGTCGTTCGA TCGCGGGAAG
ACGGTCGTCT CGTCGCGGCG GGGGTCGGTG ACGATTGCGG TCAACCCGGA CGACGGCGTG
CCGAAGGGGA TGGTGTGGCT GCCGATCCAC CACCCGGCCG TGAACGCCCT CACGCTCCCC
GTCGTCGATC CCGAGTCAGA CGAGCCGAAC CTCAAGCAGT GCGCGGTCGA CGTCCGGGCG
CCGCAGCCGT CGAACCCGTT GGTCCACGAG GGCCAGCCCA CCGTGGACGG CGAGCCCGCA
CCGACGGACG ACTGA
 
Protein sequence
MSEWTPTTCM RCAVGCGHLQ QGYTNNYGLD TVRGDASHPV NRGLACQRGV SETADPDGDW 
LTRPLVREDG TLVPTSWETA IGTVVSHIED ALAETRDGVA VLGSGQQTNE AAYALGKLAR
GGFGTRYYDA NTTLCMASAV TAYYQAFGSD APPPTYEDIP DAETHVIWGA NPAVAHPVMY
RWIADSASDD DSELIVVDPV ESETVDDADL HAQVDPGTDL AFARAVLAQT VADDAVDREF
VAEATTGFEA TVDSLPSVRE AAETAGVSVE TVERVAEAMT DSALVYWGMG VNQSVQGTAT
SRALIDLCLA TGNLRPGSGP FSLTGQANSM GTRVCSSKGT WPGQRGFTDP EERQFIADEW
EIPRSRLPDD PGPGPVGIVD AVADGPPEVC WTVATNPVAG MPDASEVRSA LDDAFLVAQD
AFRTETVELA DVVLPAATWG ESEGTVTNME RRISRVRAAT ETSPKIKQDL DIIVAIGAAI
DGELFPRPAL SPESVFDELR ALTAGTPADL SGISYDRLEA ERAVRWPAPS PEAEGGYRYV
DNDGWSFPTP SGRARFSTGA HDGLAEPTDD EFPLTLTTGR QADAYNTGVR SRGTGTDDPP
MARIHPETTL EYIESFDRGK TVVSSRRGSV TIAVNPDDGV PKGMVWLPIH HPAVNALTLP
VVDPESDEPN LKQCAVDVRA PQPSNPLVHE GQPTVDGEPA PTDD