| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_1366 |
|---|
| Symbol | |
|---|
| ID | 7400685 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorubrum lacusprofundi ATCC 49239 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_012029 |
|---|
| Strand | + |
|---|
| Start bp | 1378758 |
|---|
| End bp | 1379468 |
|---|
| Gene Length | 711 bp |
|---|
| Protein Length | 236 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 643708428 |
|---|
| Product | protein of unknown function DUF1405 |
|---|
| Protein accession | YP_002566025 |
|---|
| Protein GI | 222479788 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4347] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACATCG TCGATGCGCT CGGCCGCGAC CCGCCGGACC GCGAGTCGCT GCCGCGGTGG
CTCGCCCCGC TCCCGAAGGC GCTGGAGGAT ATCGCCTTCC GGTTCGTTTG GGTCATCGTC
GCCATCAACC TCCTCGGTAC CGCGTTCGGC TTCTGGTACT ACCGGTTCCA GTTCCGCGAG
CTTCCGGTCG AGATGTGGGC GTTCATCCCC GACAGCCCGG GCGCGACGCT GCTGATCGCG
CTGGCGCTCG CGGCATGGGC CCTCGGCCGG TCGAGCGACA CGCTCGCGAC GCTCGCCTTC
TTCGGAAACG TCAAGCTCGG GCTCTGGACC CCGTACGTGC TCGTCGTCTT CTACCCGGCG
TTCCTCGCGA ACTCGGGGCC CGCGATGTAC GCGTTCCTCC TCGTGAGTCA CCTCGGGATG
GTCGTGCAGG CGTTCGTCCT CCACCGGATC ACCGACTTCC CGCTGAAGGC GGTCGGGATC
GCGACCGCGT GGTACACGGT CGACCTGCTG ATGGACTACT TCGTCCCCGT GATCGGCGAG
GTGACCCACA CATCGATCCC CTACCTCGAT ACCGAGCCGT GGTTCACGAC GACCGTGTTG
CAGGTCGCGG CGGCCGGCGC CGTCGCGCTC ACCGTGATCC CGCTGTTCTG GGCGCTCGCG
ACGCGGGTCG CCACGCTCCA AATCCGGCTC GATCGCGGCG ATGGCGCCTG A
|
|---|
| Protein sequence | MNIVDALGRD PPDRESLPRW LAPLPKALED IAFRFVWVIV AINLLGTAFG FWYYRFQFRE
LPVEMWAFIP DSPGATLLIA LALAAWALGR SSDTLATLAF FGNVKLGLWT PYVLVVFYPA
FLANSGPAMY AFLLVSHLGM VVQAFVLHRI TDFPLKAVGI ATAWYTVDLL MDYFVPVIGE
VTHTSIPYLD TEPWFTTTVL QVAAAGAVAL TVIPLFWALA TRVATLQIRL DRGDGA
|
|---|
| |