Gene Hlac_1336 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_1336 
Symbol 
ID7399431 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp1350845 
End bp1351966 
Gene Length1122 bp 
Protein Length373 aa 
Translation table11 
GC content66% 
IMG OID643708400 
ProductDMSO reductase family type II enzyme, iron-sulfur subunit 
Protein accessionYP_002565998 
Protein GI222479761 
COG category[C] Energy production and conversion 
COG ID[COG1140] Nitrate reductase beta subunit 
TIGRFAM ID[TIGR03478] DMSO reductase family type II enzyme, iron-sulfur subunit 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAAGA CCACCGAGGA TGCGACCCGC CAGACCGACG ACGACGCTCG CCAGACCGAC 
GACACGGTCC GCCAGACCGA CGACGGCGAC GTGTCGCTCG CGGAGGGCGT CGATCATCAG
GTCGCGATGG TGATGGACCT GAACAAGTGC ATCGGCTGCC AGACGTGTAC GATCGCGTGT
AAGACCAACT GGACCGAGTC CGGGGGCCGC GAGTACATGT ACTGGAACAA CGTCGAGACG
AAGCCCGGCG CCGGCTACCC CCGCGACTGG GAGGAGTTGG GCGGCGGCTG GGACGAGGAG
GGGCAGTCCC GAACGCCCGG CGAACTCCCG GAGAAGGAGG ACTACGGTCG TGCGTGGGAC
TTCAACCACG AGGCGATCAT GTACGAGGGG AGCGACGAGC CGCTCCGCCC CATGGAGAAC
GCCGACTGGG GGCCGAACTG GGACGAGGAC GAGGGTGCCG GCGAGTACCC CAACTCCTAC
TACTTCTACC TCCCCCGGAT CTGCAACCAC TGTACGCACC CCTCCTGCGT CGAGGCGTGC
CCGCGCTCGG CGATCTACAA GCGCGAGGAG GACGGGATCG TCCTCGTCGA TCAGGACCGC
TGCCGCGGCT ACCGGTACTG CGTCGAGGGG TGTCCCTACA AGAAGGTGTT CTACAACGCA
CAGACGAAGA CCAGCGAGAA GTGCATCTTC TGTTACCCCC GGATCGAAGG AGAAGGGCCG
GAGGGCGAGG TGCGGCCCCC GTCCTGCGCC GAGGACTGCC CGCCGCAGCT CCGGCACGTC
GGCTTCCTCG ACGACGAGGA CGGTCCGATT CACAAGCTCG TCAACGAGTA CGAGGTCGCC
TTACGGCTCC ACCCCGAGTA CCGGACCGAG CCGAACGTCT ACTACATCCC GCCGTACGCG
CCGCCACAGA CCTCCGAGAG CGGCGAGACG GTGGACGCCA ACCGGATTCC GCGCAACTAC
CTGGAAGAGC TGTTCGGCCC GGAGGTCGAG TCGGCGCTCA ACACGATCAC CCGCGAGCGG
GAGAAGGCCG AGCGCGGCGA GGAGAGCGAA CTCATGGAGA TCCTCTCGAC CGTGAACAAC
GACGACCAGT ACCGGTTGGA GGTGTTCGAC GATGACGGCT GA
 
Protein sequence
MSKTTEDATR QTDDDARQTD DTVRQTDDGD VSLAEGVDHQ VAMVMDLNKC IGCQTCTIAC 
KTNWTESGGR EYMYWNNVET KPGAGYPRDW EELGGGWDEE GQSRTPGELP EKEDYGRAWD
FNHEAIMYEG SDEPLRPMEN ADWGPNWDED EGAGEYPNSY YFYLPRICNH CTHPSCVEAC
PRSAIYKREE DGIVLVDQDR CRGYRYCVEG CPYKKVFYNA QTKTSEKCIF CYPRIEGEGP
EGEVRPPSCA EDCPPQLRHV GFLDDEDGPI HKLVNEYEVA LRLHPEYRTE PNVYYIPPYA
PPQTSESGET VDANRIPRNY LEELFGPEVE SALNTITRER EKAERGEESE LMEILSTVNN
DDQYRLEVFD DDG